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Sample GSM3418 Query DataSets for GSM3418
Status Public on Apr 21, 2003
Title HDMTX-13
Sample type RNA
 
Source name Primary Acute Lymphoblastic Leukemia Cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample User: jmorris
Description: ALL-post patient study
Comments:
Experiment User: dpatel
Algorithm: Statistical
Corner+ Avg:326, Count:32
Corner- Avg:31904, Count:32
BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:7.404772,SFGene:All
Background:Avg:585.04,Stdev:47.68,Max:671.6,Min:469.8
Noise:Avg:12.17,Stdev:0.93,Max:15.1,Min:10.0
RawQ:15.78
Keywords = ALL
 
Submission date Jan 02, 2003
Last update date Mar 16, 2009
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL8300
Series (3)
GSE221 HDMTX-13 pair
GSE268 HDMTX
GSE412 Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value

Data table
ID_REF VALUE Detection_p_value
1000_at 1154.0 0.039365
1001_at 211.9 0.358690
1002_f_at 36.0 0.945530
1003_s_at 85.5 0.621816
1004_at 53.3 0.901946
1005_at 4389.7 0.000266
1006_at 24.5 0.892699
1007_s_at 664.8 0.008689
1008_f_at 4275.5 0.000805
1009_at 3274.6 0.000219
100_g_at 369.5 0.339558
1010_at 39.1 0.810313
1011_s_at 401.6 0.004180
1012_at 298.2 0.378184
1013_at 14.0 0.837065
1014_at 933.8 0.031336
1015_s_at 73.0 0.926170
1016_s_at 41.3 0.951005
1017_at 152.7 0.765443
1018_at 59.2 0.861235

Total number of rows: 12625

Table truncated, full table size 297 Kbytes.




Supplementary data files not provided

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