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Sample GSM3425 Query DataSets for GSM3425
Status Public on Apr 21, 2003
Title HDMTX-10
Sample type RNA
 
Source name Primary Acute Lymphoblastic Leukemia Cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample User: jmorris
Description: ALL-post patient study
Comments:
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:344, Count:32
Corner- Avg:37169, Count:32
BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:5.367657,SFGene:All
Background:Avg:396.15,Stdev:5.74,Max:419.3,Min:387.1
Noise:Avg:8.65,Stdev:0.21,Max:9.3,Min:7.9
RawQ:12.60
Keywords = ALL
 
Submission date Jan 02, 2003
Last update date Mar 16, 2009
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL8300
Series (3)
GSE218 HDMTX-10 pair
GSE268 HDMTX
GSE412 Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value

Data table
ID_REF VALUE Detection_p_value
1000_at 605.0 0.048995
1001_at 480.3 0.001141
1002_f_at 35.2 0.697453
1003_s_at 116.3 0.561639
1004_at 184.1 0.621816
1005_at 3308.9 0.000219
1006_at 83.0 0.641310
1007_s_at 1184.2 0.002617
1008_f_at 1877.1 0.002228
1009_at 5012.6 0.000266
100_g_at 302.2 0.458816
1010_at 93.8 0.602006
1011_s_at 1684.8 0.000388
1012_at 199.1 0.098054
1013_at 83.6 0.438361
1014_at 1185.2 0.000673
1015_s_at 113.0 0.861235
1016_s_at 30.8 0.933135
1017_at 121.8 0.458816
1018_at 34.9 0.861235

Total number of rows: 12625

Table truncated, full table size 295 Kbytes.




Supplementary data files not provided

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