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Status
Public on Apr 21, 2003
Title
HDMTX-10
Sample type
RNA
Source name
Primary Acute Lymphoblastic Leukemia Cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample User: jmorris Description: ALL-post patient study Comments: Experiment User: jmorris Algorithm: Statistical Corner+ Avg:344, Count:32 Corner- Avg:37169, Count:32 BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:5.367657,SFGene:All Background:Avg:396.15,Stdev:5.74,Max:419.3,Min:387.1 Noise:Avg:8.65,Stdev:0.21,Max:9.3,Min:7.9 RawQ:12.60 Keywords = ALL
Submission date
Jan 02, 2003
Last update date
Mar 16, 2009
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL8300
Series (3)
GSE218
HDMTX-10 pair
GSE268
HDMTX
GSE412
Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Data table
ID_REF
VALUE
Detection_p_value
1000_at
605.0
0.048995
1001_at
480.3
0.001141
1002_f_at
35.2
0.697453
1003_s_at
116.3
0.561639
1004_at
184.1
0.621816
1005_at
3308.9
0.000219
1006_at
83.0
0.641310
1007_s_at
1184.2
0.002617
1008_f_at
1877.1
0.002228
1009_at
5012.6
0.000266
100_g_at
302.2
0.458816
1010_at
93.8
0.602006
1011_s_at
1684.8
0.000388
1012_at
199.1
0.098054
1013_at
83.6
0.438361
1014_at
1185.2
0.000673
1015_s_at
113.0
0.861235
1016_s_at
30.8
0.933135
1017_at
121.8
0.458816
1018_at
34.9
0.861235
Total number of rows: 12625 Table truncated, full table size 295 Kbytes .Supplementary data files not provided