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Status
Public on Apr 21, 2003
Title
HDMTX-8
Sample type
RNA
Source name
Primary Acute Lymphoblastic Leukemia Cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample User: jmorris Description: ALL-post patient study Comments: Experiment User: dpatel Algorithm: Statistical Corner+ Avg:318, Count:32 Corner- Avg:40188, Count:32 BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:5.120892,SFGene:All Background:Avg:521.89,Stdev:28.41,Max:587.8,Min:478.3 Noise:Avg:9.78,Stdev:0.69,Max:11.9,Min:8.4 RawQ:14.30 Keywords = ALL
Submission date
Jan 02, 2003
Last update date
Mar 16, 2009
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL8300
Series (3)
GSE237
HDMTX-8 pair
GSE268
HDMTX
GSE412
Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Data table
ID_REF
VALUE
Detection_p_value
1000_at
664.2
0.031336
1001_at
62.7
0.602006
1002_f_at
15.8
0.861235
1003_s_at
40.3
0.679170
1004_at
326.3
0.218983
1005_at
1250.8
0.000219
1006_at
18.9
0.715253
1007_s_at
530.7
0.043968
1008_f_at
862.1
0.002228
1009_at
4711.5
0.000219
100_g_at
496.4
0.031336
1010_at
122.6
0.541184
1011_s_at
982.7
0.001354
1012_at
22.5
0.621816
1013_at
6.8
0.999327
1014_at
1603.2
0.001602
1015_s_at
54.8
0.956032
1016_s_at
55.0
0.926170
1017_at
227.4
0.089405
1018_at
41.5
0.861235
Total number of rows: 12625 Table truncated, full table size 296 Kbytes .Supplementary data files not provided