NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM3447 Query DataSets for GSM3447
Status Public on Apr 21, 2003
Title HDMTX-4
Sample type RNA
 
Source name Primary Acute Lymphoblastic Leukemia Cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample User: jmorris
Description: ALL-post patient study
Comments:
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:204, Count:32
Corner- Avg:38726, Count:32
BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:6.096644,SFGene:All
Background:Avg:515.16,Stdev:16.02,Max:542.9,Min:478.8
Noise:Avg:10.41,Stdev:0.39,Max:11.8,Min:9.5
RawQ:14.37
Keywords = ALL
 
Submission date Jan 02, 2003
Last update date Mar 16, 2009
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL8300
Series (3)
GSE233 HDMTX-4 pair
GSE268 HDMTX
GSE412 Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value

Data table
ID_REF VALUE Detection_p_value
1000_at 834.2 0.021866
1001_at 271.9 0.234557
1002_f_at 12.8 0.926170
1003_s_at 85.5 0.795978
1004_at 265.6 0.581931
1005_at 3690.8 0.000219
1006_at 150.7 0.479380
1007_s_at 952.9 0.031336
1008_f_at 2672.7 0.001892
1009_at 3568.8 0.000219
100_g_at 496.3 0.320830
1010_at 31.3 0.892699
1011_s_at 647.8 0.002228
1012_at 311.8 0.081337
1013_at 11.7 0.975289
1014_at 1024.3 0.019304
1015_s_at 98.1 0.901946
1016_s_at 159.3 0.438361
1017_at 265.9 0.250724
1018_at 232.6 0.479380

Total number of rows: 12625

Table truncated, full table size 296 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap