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Sample GSM344978 Query DataSets for GSM344978
Status Public on Mar 01, 2009
Title 5-Aza-CdR D7 B-rep1,rep2
Sample type RNA
 
Source name MCF7 Cells
Organism Homo sapiens
Characteristics MCF7 Cells treated with 1 uM 5-Aza-CdR for 24h. Cells harvested on day 7
Extracted molecule total RNA
Extraction protocol Qiagen RNAEasy Kit
Label Cy3
Label protocol According to Illumina protocol
 
Hybridization protocol According to Illumina protocol
Scan protocol According to Illumina protocol
Description The data was processed using beadstudio which averaged the two raw data files. There is no normalization.
Data processing The data was processed using Illumina Beadstudio which averaged the two raw data files. There is no normalization.
 
Submission date Nov 25, 2008
Last update date Dec 03, 2008
Contact name Tina Miranda
E-mail(s) tina.miranda@usc.edu
Organization name USC
Street address 1441 Eastlake Ave
City Los Angeles
State/province CA
ZIP/Postal code 90033
Country USA
 
Platform ID GPL6884
Series (1)
GSE13733 Effects of DZNep and 5-Aza-CdR on gene expression in MCF7 cells

Data table header descriptions
ID_REF
VALUE Signal

Data table
ID_REF VALUE
ILMN_1762337 101
ILMN_2055271 68
ILMN_1736007 49.7
ILMN_2383229 52.6
ILMN_1806310 56
ILMN_1779670 60.2
ILMN_2321282 57.1
ILMN_1671474 52.4
ILMN_1772582 57.5
ILMN_1735698 90
ILMN_1653355 73.1
ILMN_1717783 50
ILMN_1705025 53.1
ILMN_1814316 50.5
ILMN_2359168 60.1
ILMN_1731507 45.3
ILMN_1787689 56.4
ILMN_1745607 55.1
ILMN_2136495 49.2
ILMN_1668111 45.9

Total number of rows: 48803

Table truncated, full table size 864 Kbytes.




Supplementary file Size Download File type/resource
GSM344978.csv.gz 288.4 Kb (ftp)(http) CSV
GSM344978_1.csv.gz 288.4 Kb (ftp)(http) CSV
Processed data included within Sample table

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