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Sample GSM3485 Query DataSets for GSM3485
Status Public on Apr 21, 2003
Title HDMTX-DX-11
Sample type RNA
 
Source name Primary Acute Lymphoblastic Leukemia Cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample Type: human total RNA
Sample User: dpatel
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:279, Count:32
Corner- Avg:39991, Count:32
BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:6.675019,SFGene:All
Background:Avg:404.51,Stdev:3.70,Max:415.5,Min:396.6
Noise:Avg:9.59,Stdev:0.26,Max:10.5,Min:8.7
RawQ:13.42
Keywords = ALL
 
Submission date Jan 03, 2003
Last update date Mar 16, 2009
Contact name William E Evans
E-mail(s) william.evans@stjude.org
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL8300
Series (2)
GSE219 HDMTX-11 pair
GSE412 Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value

Data table
ID_REF VALUE Detection_p_value
1000_at 902.0 0.027860
1001_at 142.9 0.520620
1002_f_at 215.0 0.358690
1003_s_at 220.7 0.602006
1004_at 35.9 0.933135
1005_at 1188.3 0.001892
1006_at 146.9 0.339558
1007_s_at 1094.0 0.007543
1008_f_at 4467.1 0.000468
1009_at 4591.4 0.000219
100_g_at 500.8 0.127645
1010_at 98.9 0.765443
1011_s_at 546.5 0.007543
1012_at 53.3 0.500000
1013_at 15.1 0.933135
1014_at 1078.1 0.005643
1015_s_at 66.6 0.960635
1016_s_at 63.9 0.810313
1017_at 225.5 0.098054
1018_at 135.4 0.602006

Total number of rows: 12600

Table truncated, full table size 295 Kbytes.




Supplementary data files not provided

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