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Status
Public on Apr 21, 2003
Title
HDMTX-DX-11
Sample type
RNA
Source name
Primary Acute Lymphoblastic Leukemia Cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample Type: human total RNA Sample User: dpatel Experiment User: jmorris Algorithm: Statistical Corner+ Avg:279, Count:32 Corner- Avg:39991, Count:32 BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:6.675019,SFGene:All Background:Avg:404.51,Stdev:3.70,Max:415.5,Min:396.6 Noise:Avg:9.59,Stdev:0.26,Max:10.5,Min:8.7 RawQ:13.42 Keywords = ALL
Submission date
Jan 03, 2003
Last update date
Mar 16, 2009
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL8300
Series (2)
GSE219
HDMTX-11 pair
GSE412
Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Data table
ID_REF
VALUE
Detection_p_value
1000_at
902.0
0.027860
1001_at
142.9
0.520620
1002_f_at
215.0
0.358690
1003_s_at
220.7
0.602006
1004_at
35.9
0.933135
1005_at
1188.3
0.001892
1006_at
146.9
0.339558
1007_s_at
1094.0
0.007543
1008_f_at
4467.1
0.000468
1009_at
4591.4
0.000219
100_g_at
500.8
0.127645
1010_at
98.9
0.765443
1011_s_at
546.5
0.007543
1012_at
53.3
0.500000
1013_at
15.1
0.933135
1014_at
1078.1
0.005643
1015_s_at
66.6
0.960635
1016_s_at
63.9
0.810313
1017_at
225.5
0.098054
1018_at
135.4
0.602006
Total number of rows: 12600 Table truncated, full table size 295 Kbytes .Supplementary data files not provided