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Status
Public on Apr 21, 2003
Title
LDMTX_MP-DX-16
Sample type
RNA
Source name
Primary Acute Lymphoblastic Leukemia Cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample Type: human total RNA Sample User: jmorris Description: ALL-pre patient study Comments: Experiment User: jmorris Algorithm: Statistical Corner+ Avg:198, Count:32 Corner- Avg:34063, Count:32 BF: Alpha1:0.04,Alpha2:0.06,Tau:0.015,Gamma1H:0.0025,Gamma1L:0.0025,Gamma2H:0.003,Gamma2L:0.003,Perturbation:1.1,TGT:500,NF:1.000000,SF:16.661921,SFGene:All Background:Avg:350.18,Stdev:6.94,Max:371.2,Min:338.0 Noise:Avg:9.79,Stdev:0.45,Max:11.9,Min:8.8 RawQ:13.14 Keywords = ALL
Submission date
Jan 03, 2003
Last update date
Mar 16, 2009
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL8300
Series (2)
GSE246
LDMTX_MP-16 pair
GSE412
Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Data table
ID_REF
VALUE
Detection_p_value
1000_at
828.3
0.073830
1001_at
271.5
0.438361
1002_f_at
113.2
0.849473
1003_s_at
489.2
0.479380
1004_at
58.8
0.795978
1005_at
3079.1
0.000959
1006_at
150.3
0.781017
1007_s_at
1045.5
0.043968
1008_f_at
9180.6
0.000805
1009_at
1948.7
0.007543
100_g_at
351.5
0.561639
1010_at
37.4
0.975289
1011_s_at
780.8
0.031336
1012_at
63.7
0.679170
1013_at
17.6
0.990025
1014_at
293.9
0.418069
1015_s_at
72.4
0.978134
1016_s_at
94.8
0.795978
1017_at
57.6
0.918663
1018_at
352.6
0.267463
Total number of rows: 12625 Table truncated, full table size 297 Kbytes .Supplementary data files not provided