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Sample GSM360098 Query DataSets for GSM360098
Status Public on Jan 15, 2009
Title heart_WT_rep1
Sample type RNA
 
Source name Heart, wild type1
Organism Mus musculus
Characteristics Heart RNA
Biomaterial provider Harlan
Extracted molecule total RNA
Extraction protocol Trizol extraction
Label Biotin
Label protocol Ambion MessageAmp II-biotin enhanced kit (manufacturer's recommendations)
 
Hybridization protocol Performed according to the manufacturer's (Affymetrix) recommendations
Scan protocol Performed according to the manufacturer's (Affymetrix) recommendations
Description Heart, wild type1
Data processing Raw intensities from the CEL files were analyzed using Affymetrix Power Tool (APT, version 1.8.5) to generate robust multi-array average intensity in log2 scale for each probe set. The perfect match intensities for each probe set were corrected for background and quantile-normalized using a robust fit of linear models.
 
Submission date Jan 13, 2009
Last update date Jan 14, 2009
Contact name Masaki Ieda
E-mail(s) mieda@gladstone.ucsf.edu
Phone 415-734-2880
Organization name Gladstone Institute
Street address 1650 Owens street,
City San Francisco
State/province CA
ZIP/Postal code 94404
Country USA
 
Platform ID GPL6246
Series (2)
GSE14411 Gene expression in b1-integrin wild-type and knockout mouse heart
GSE14414 Gene expression in mouse heart

Data table header descriptions
ID_REF
VALUE log2Intensity

Data table
ID_REF VALUE
10473562 3.801
10385500 5.995
10593927 7.764
10457733 9.232
10476889 8.469
10438425 4.466
10442238 5.822
10539444 6.354
10424411 9.721
10565355 3.356
10362379 7.5
10461640 6.914
10398100 5.601
10517791 4.951
10578690 8.491
10442236 6.742
10399760 12.28
10418038 6.741
10578922 7.982
10442786 5.346

Total number of rows: 28767

Table truncated, full table size 420 Kbytes.




Supplementary file Size Download File type/resource
GSM360098.CEL.gz 4.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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