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Sample GSM361853 Query DataSets for GSM361853
Status Public on Feb 16, 2009
Title Sample_ETS4
Sample type RNA
 
Source name Sample_ETS
Organism Mus musculus
Characteristics Sample ETS4
Extracted molecule total RNA
Extraction protocol Cells from the fourth replating were collected from methylcellulose and RNAs for gene expression profiling were isolated with the Qiagen RNeasy Plus mini kit.
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol The samples were hybridized to the Illumina Mouse Ref8v1.1 Expression Beadchip Array following manufacturers instructions.
Scan protocol standard as recommended by illumina
Description none
Data processing The data was preprocessed by Bioconductor lumi package (version 1.7.18). It was vst transformed and quantile normalized.
 
Submission date Jan 20, 2009
Last update date Mar 12, 2009
Contact name monika stankiewicz
Organization name Northwestern University
Department Hematology/Oncology
Lab Crispino
Street address 303 E. Superior St. Lurie Bldg 5-250
City Chicago
State/province IL
ZIP/Postal code 60611
Country USA
 
Platform ID GPL6103
Series (1)
GSE14506 ETS2, ERG promote megakaryopoiesis, synergize with alterations in GATA1 to immortalize hematopoietic progenitor cells

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_1238136 7.28154856011465 77.24412 4.868831 0.2385787 38
ILMN_2721178 9.00587601359995 593.4956 26.93251 0 34
ILMN_2773981 10.4468210806579 1788.322 62.78692 0 45
ILMN_2771349 10.1645609164190 1455.715 74.5087 0 41
ILMN_2634566 9.61796051012514 964.9434 37.28541 0 33
ILMN_2737647 7.19210912496613 63.46959 4.518821 0.6383249 28
ILMN_2744574 7.3030028692859 80.83009 5.713035 0.1763959 31
ILMN_2739275 7.18025393432856 61.81512 3.503438 0.6890863 42
ILMN_2734484 8.27488424975686 304.0139 14.8282 0 45
ILMN_2699078 7.10878216075943 52.00593 3.597276 0.964467 32
ILMN_2692376 7.70241872876474 157.3193 8.147973 0 39
ILMN_1252243 10.8283459607342 2367.264 95.10302 0 27
ILMN_1213681 9.9579557106571 1249.922 49.2549 0 36
ILMN_2735415 7.44733477575032 106.495 6.249587 0.002538071 35
ILMN_1237980 7.25583458760945 73.12796 5.804435 0.3337564 23
ILMN_3162350 7.5206737918904 119.8214 3.516312 0 61
ILMN_2712923 8.13417233202178 259.7644 13.62108 0 34
ILMN_2670314 8.46235739476099 366.5498 12.02955 0 35
ILMN_2637698 11.3758328853687 3458.405 158.3273 0 30
ILMN_2674228 9.71357424724212 1047.463 47.58169 0 30

Total number of rows: 24613

Table truncated, full table size 1374 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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