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Sample GSM361855 Query DataSets for GSM361855
Status Public on Feb 16, 2009
Title Sample_Fli3
Sample type RNA
 
Source name Sample_Fli
Organism Mus musculus
Characteristics Sample FLI3
Extracted molecule total RNA
Extraction protocol Cells from the fourth replating were collected from methylcellulose and RNAs for gene expression profiling were isolated with the Qiagen RNeasy Plus mini kit.
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol The samples were hybridized to the Illumina Mouse Ref8v1.1 Expression Beadchip Array following manufacturers instructions.
Scan protocol standard as recommended by illumina
Description none
Data processing The data was preprocessed by Bioconductor lumi package (version 1.7.18). It was vst transformed and quantile normalized.
 
Submission date Jan 20, 2009
Last update date Mar 12, 2009
Contact name monika stankiewicz
Organization name Northwestern University
Department Hematology/Oncology
Lab Crispino
Street address 303 E. Superior St. Lurie Bldg 5-250
City Chicago
State/province IL
ZIP/Postal code 60611
Country USA
 
Platform ID GPL6103
Series (1)
GSE14506 ETS2, ERG promote megakaryopoiesis, synergize with alterations in GATA1 to immortalize hematopoietic progenitor cells

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_1238136 7.22969704461331 58.90658 3.181475 0.4580153 48
ILMN_2721178 9.1318028260357 592.7469 31.43612 0 29
ILMN_2773981 10.8344223033504 2135.678 65.56717 0 39
ILMN_2771349 10.5919421850517 1786.126 76.85368 0 41
ILMN_2634566 9.54908437930513 833.6119 27.09802 0 50
ILMN_2737647 7.29671346047084 67.89722 4.238543 0.1933842 39
ILMN_2744574 7.16520966382496 50.74067 3.101188 0.7951654 34
ILMN_2739275 7.1675421605036 51.0172 2.785702 0.7811705 44
ILMN_2734484 8.54969226989907 352.3715 17.11641 0 50
ILMN_2699078 7.07903710974948 40.81452 2.585703 0.9898219 31
ILMN_2692376 7.76855396001385 147.8268 7.838182 0 35
ILMN_1252243 11.1137463391574 2595.755 65.44915 0 49
ILMN_1213681 10.1327937532183 1297.031 55.00438 0 43
ILMN_2735415 7.35496132455305 76.16631 6.175239 0.07124682 33
ILMN_1237980 7.2755856349723 64.86323 3.045926 0.2748092 36
ILMN_3162350 7.5188956846164 101.8684 3.125792 0 67
ILMN_2712923 8.3158873337807 281.6047 13.8502 0 38
ILMN_2670314 8.53578536657189 347.66 10.75016 0 45
ILMN_2637698 11.4274060570096 3146.554 135.3579 0 32
ILMN_2674228 10.0200383984948 1183.635 53.12514 0 32

Total number of rows: 24613

Table truncated, full table size 1373 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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