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Sample GSM363870 Query DataSets for GSM363870
Status Public on Dec 28, 2009
Title Ovine Control 2
Sample type RNA
 
Source name PAEC
Organism Ovis aries
Characteristics Control
Treatment protocol Ovine PAECs were treated with vehicle (DMSO) or 5μM GW9662 for 24 hours
Growth protocol 10% FBS-DMEM
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using the Qiagen Rneasy Mini kit.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Fragmented cRNA was hybridized for 16 h at 45°C to the array chips (Affymetrix). Genechips were washed ans stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description n/a
Data processing Microarray data were processed and normalized using RMA.
 
Submission date Jan 23, 2009
Last update date Jan 23, 2009
Contact name Jing Tian
E-mail(s) jtian@mcg.edu
Phone 706-721-0074
Organization name Medical College of Georgia
Department Vascular Biology Center
Lab Lab of Stephen M. Black
Street address 1459 Laney Walker BLVD
City Augusta
State/province GA
ZIP/Postal code 30912
Country USA
 
Platform ID GPL2112
Series (1)
GSE14546 Effect of PPARγ inhibition on pulmonary endothelial cell gene expression: Gene profiling in pulmonary hypertension

Data table header descriptions
ID_REF
VALUE RMA normalized signal intensity

Data table
ID_REF VALUE
AFFX-BioB-3_at 4.915657819
AFFX-BioB-5_at 5.104870961
AFFX-BioB-M_at 6.208665131
AFFX-BioC-3_at 7.698400235
AFFX-BioC-5_at 6.874373564
AFFX-BioDn-3_at 10.05887
AFFX-BioDn-5_at 8.912623458
AFFX-Bt-A00196-1_s_at 2.239065904
AFFX-Bt-AB076373-1_at 2.347689741
AFFX-Bt-actin-3_at 2.542312712
AFFX-Bt-actin-5_at 2.641115605
AFFX-Bt-actin-M_at 2.325975748
AFFX-Bt-AF292559-1_at 2.236667025
AFFX-Bt-AF292559-2_s_at 3.773648896
AFFX-Bt-AF292559-3_s_at 2.995267492
AFFX-Bt-AF292559-4_s_at 2.239342732
AFFX-Bt-AF292560-1_s_at 3.186521596
AFFX-Bt-AF298789-1_at 2.264657794
AFFX-Bt-AF323980-1_at 2.565059339
AFFX-Bt-AJ002682-1_s_at 2.092203099

Total number of rows: 24128

Table truncated, full table size 676 Kbytes.




Supplementary file Size Download File type/resource
GSM363870.CEL.gz 1.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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