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Sample GSM363875 Query DataSets for GSM363875
Status Public on Dec 28, 2009
Title Ovine GW9662 2
Sample type RNA
 
Source name PAEC
Organism Ovis aries
Characteristics GW9662 treated
Treatment protocol Ovine PAECs were treated with vehicle (DMSO) or 5μM GW9662 for 24 hours
Growth protocol 10% FBS-DMEM
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using the Qiagen Rneasy Mini kit.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Fragmented cRNA was hybridized for 16 h at 45°C to the array chips (Affymetrix). Genechips were washed ans stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description n/a
Data processing Microarray data were processed and normalized using RMA.
 
Submission date Jan 23, 2009
Last update date Jan 23, 2009
Contact name Jing Tian
E-mail(s) jtian@mcg.edu
Phone 706-721-0074
Organization name Medical College of Georgia
Department Vascular Biology Center
Lab Lab of Stephen M. Black
Street address 1459 Laney Walker BLVD
City Augusta
State/province GA
ZIP/Postal code 30912
Country USA
 
Platform ID GPL2112
Series (1)
GSE14546 Effect of PPARγ inhibition on pulmonary endothelial cell gene expression: Gene profiling in pulmonary hypertension

Data table header descriptions
ID_REF
VALUE RMA normalized signal intensity

Data table
ID_REF VALUE
AFFX-BioB-3_at 4.915835221
AFFX-BioB-5_at 5.300982771
AFFX-BioB-M_at 6.022829805
AFFX-BioC-3_at 7.8277068
AFFX-BioC-5_at 6.862990844
AFFX-BioDn-3_at 10.24143697
AFFX-BioDn-5_at 9.088863758
AFFX-Bt-A00196-1_s_at 2.226838639
AFFX-Bt-AB076373-1_at 2.33467726
AFFX-Bt-actin-3_at 2.509635847
AFFX-Bt-actin-5_at 2.627861984
AFFX-Bt-actin-M_at 2.308097241
AFFX-Bt-AF292559-1_at 2.220877316
AFFX-Bt-AF292559-2_s_at 3.43322729
AFFX-Bt-AF292559-3_s_at 2.85455251
AFFX-Bt-AF292559-4_s_at 2.228928229
AFFX-Bt-AF292560-1_s_at 2.992570685
AFFX-Bt-AF298789-1_at 2.245446962
AFFX-Bt-AF323980-1_at 2.529572037
AFFX-Bt-AJ002682-1_s_at 2.083516569

Total number of rows: 24128

Table truncated, full table size 676 Kbytes.




Supplementary file Size Download File type/resource
GSM363875.CEL.gz 1.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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