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Sample GSM363877 Query DataSets for GSM363877
Status Public on Dec 28, 2009
Title Ovine GW9662 4
Sample type RNA
 
Source name PAEC
Organism Ovis aries
Characteristics GW9662 treated
Treatment protocol Ovine PAECs were treated with vehicle (DMSO) or 5μM GW9662 for 24 hours
Growth protocol 10% FBS-DMEM
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using the Qiagen Rneasy Mini kit.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Fragmented cRNA was hybridized for 16 h at 45°C to the array chips (Affymetrix). Genechips were washed ans stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description n/a
Data processing Microarray data were processed and normalized using RMA.
 
Submission date Jan 23, 2009
Last update date Jan 23, 2009
Contact name Jing Tian
E-mail(s) jtian@mcg.edu
Phone 706-721-0074
Organization name Medical College of Georgia
Department Vascular Biology Center
Lab Lab of Stephen M. Black
Street address 1459 Laney Walker BLVD
City Augusta
State/province GA
ZIP/Postal code 30912
Country USA
 
Platform ID GPL2112
Series (1)
GSE14546 Effect of PPARγ inhibition on pulmonary endothelial cell gene expression: Gene profiling in pulmonary hypertension

Data table header descriptions
ID_REF
VALUE RMA normalized signal intensity

Data table
ID_REF VALUE
AFFX-BioB-3_at 4.742151101
AFFX-BioB-5_at 5.348607612
AFFX-BioB-M_at 6.13300225
AFFX-BioC-3_at 7.758624911
AFFX-BioC-5_at 7.04752438
AFFX-BioDn-3_at 10.14154173
AFFX-BioDn-5_at 9.001172418
AFFX-Bt-A00196-1_s_at 2.217674491
AFFX-Bt-AB076373-1_at 2.333840431
AFFX-Bt-actin-3_at 2.488256443
AFFX-Bt-actin-5_at 2.619613479
AFFX-Bt-actin-M_at 2.296131026
AFFX-Bt-AF292559-1_at 2.210929727
AFFX-Bt-AF292559-2_s_at 3.452298368
AFFX-Bt-AF292559-3_s_at 2.846250397
AFFX-Bt-AF292559-4_s_at 2.219749008
AFFX-Bt-AF292560-1_s_at 2.994387417
AFFX-Bt-AF298789-1_at 2.235290824
AFFX-Bt-AF323980-1_at 2.520391107
AFFX-Bt-AJ002682-1_s_at 2.076975607

Total number of rows: 24128

Table truncated, full table size 676 Kbytes.




Supplementary file Size Download File type/resource
GSM363877.CEL.gz 1.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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