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Sample GSM36729 Query DataSets for GSM36729
Status Public on Dec 07, 2004
Title Hearts_Polarity-1_Array1(dye_flip)
Sample type RNA
 
Channel 1
Source name Adult Heart labeled with Cy5
Organism Homo sapiens
Extracted molecule total RNA
 
Channel 2
Source name Fetal Heart labeled with Cy3
Organism Homo sapiens
Extracted molecule total RNA
 
 
Description Fetal Heart and Adult Heart commercial polyA RNA samples
Amplified and labeled according to standard Agilent protocols, slides printed on 2%UDS with LoGlo process
Data processed with FeatureExtraction v7.1, only good features are reported (no saturated or outliers)
Keywords = Adult Heart, Fetal Heart
 
Submission date Dec 01, 2004
Last update date May 27, 2005
Contact name Svetlana Shchegrova
E-mail(s) svetlana_shchegrova@agilent.com
Phone 650-485-4086
Organization name Agilent Technologies, Inc
Street address
City Palo Alto
State/province CA
ZIP/Postal code 94304
Country USA
 
Platform ID GPL1708
Series (1)
GSE2035 Hearts_DD_Screening

Data table header descriptions
ID_REF refers to ID column in the platform table
VALUE Log10 Ratio of normalized Cy5 (red) signal to normalized Cy3 (green) signal
PValueLogRatio p-value of the log ratio as determined by Agilent error model
gMeanSignal raw Cy3 (green) signal for Fetal Heart sample
rMeanSignal raw Cy5 (red) signal for Adult Heart sample
gProcessedSignal normalized and background subtracted Cy3 (green) signal
rProcessedSignal normalized and background subtracted Cy5 (red) signal

Data table
ID_REF VALUE PValueLogRatio gMeanSignal rMeanSignal gProcessedSignal rProcessedSignal
1 -1.38 1.089091e-21 647.42 75.42 705.82 29.41
2 0.00 1.00 28.67 41.00 0.83 0.91
3 0.13 0.12 42.75 66.17 15.78 21.58
4 0.01 0.92 39.03 55.13 11.54 11.83
5 0.28 2.390208e-05 147.51 341.22 136.18 261.11
6 0.15 0.49 32.78 48.85 4.45 6.36
7 -2.00 2.740676e-23 710.48 46.40 771.61 4.02
8 0.45 0.56 29.06 44.68 0.83 2.38
9 0.04 0.61 41.96 60.58 14.90 16.64
10 0.13 0.05 56.15 89.73 30.95 42.43
11 0.33 9.848289e-07 15831.59 31015.11 15021.84 32583.67
12 0.05 0.34 194.06 290.96 189.84 216.98
13 0.50 4.757939e-06 35.46 69.42 7.58 24.54
14 -2.00 2.484316e-23 721.60 45.60 783.71 3.34
15 0.92 2.009035e-18 104.21 894.07 87.02 739.34
16 0.00 1.00 28.96 41.25 0.83 0.91
17 0.04 0.60 44.70 64.33 18.02 19.97
18 -0.21 1.098435e-03 101.48 98.28 82.46 49.82
19 -0.04 0.42 439.14 528.53 472.90 422.43
20 0.32 2.358571e-06 160.62 408.48 151.71 318.85

Total number of rows: 43920

Table truncated, full table size 1868 Kbytes.




Supplementary file Size Download File type/resource
GSM36729.tif.gz 17.1 Mb (ftp)(http) TIFF

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