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Sample GSM370393 Query DataSets for GSM370393
Status Public on Feb 12, 2009
Title Lasp1+/+ MEFs, rep1
Sample type RNA
 
Source name mouse embryonic fibroblasts, Lasp1+/+
Organism Mus musculus
Characteristics strain: C57Bl/6NCr
genotype: wild type
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using a Perfect RNA Tissue kit (5 Prime Inc., Gaithersburg, MD) following manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol.
Scan protocol Standard Illumina scanning protocol.
Description Replicate 1 of 3.
Data processing The data were normalized using mean/median scaling normalization and Welch t test with array track v3.3.
 
Submission date Feb 11, 2009
Last update date Feb 11, 2009
Contact name Han Zhang
E-mail(s) hzhang@mcg.edu
Organization name Medical College of Georgia
Department IMMAG
Lab CB2701
Street address 1120 15th st
City Augusta
State/province GA
ZIP/Postal code 30909
Country USA
 
Platform ID GPL6887
Series (1)
GSE14800 Lasp1 gene disruption is linked to enhanced cell migration and tumor formation

Data table header descriptions
ID_REF
VALUE Normalized signal intensity
Raw Data Non-normalized average detection signal

Data table
ID_REF VALUE Raw Data
ILMN_1212602 1494.667725 182.2121
ILMN_1212603 809.6800537 98.67619
ILMN_1212605 5445.446777 663.7908
ILMN_1212607 949.9589844 115.8239
ILMN_1212612 2726.825195 332.4044
ILMN_1212614 956.5217285 116.5832
ILMN_1212619 2047.579956 249.5731
ILMN_1212623 949.1386108 115.6674
ILMN_1212625 11247.74414 1371.148
ILMN_1212626 2484.003174 302.7711
ILMN_1212628 1007.383118 122.8419
ILMN_1212632 1353.568481 164.9547
ILMN_1212633 1006.562744 122.661
ILMN_1212636 52050.85938 6344.991
ILMN_1212637 9109.925781 1110.492
ILMN_1212638 91937.65625 11207.17
ILMN_1212639 2358.490479 287.5467
ILMN_1212644 1009.023804 122.973
ILMN_1212645 855.6193848 104.2879
ILMN_1212646 13431.50098 1637.315

Total number of rows: 45281

Table truncated, full table size 1493 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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