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|
| Status |
Public on Feb 26, 2009 |
| Title |
10.5h mosquito embryo RNA, biological replicate 3 |
| Sample type |
RNA |
| |
|
| Source name |
10.5h mosquito embryo
|
| Organism |
Anopheles gambiae |
| Characteristics |
strain: Kisumu
|
| Treatment protocol |
see (Goltsev, Rezende et al 2008). Hand-dissected fixed 10.5h mosquito embryos were used as source
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA from fixed material was extracted by RecoverALL (Ambion)
|
| Label |
biotin
|
| Label protocol |
Affymetrix protocol and kit for two step amplification was used
|
| |
|
| Hybridization protocol |
regular, as described by Affymetrix manual
|
| Scan protocol |
regular, as described by Affymetrix manual
|
| Description |
Formaldehyde-fixed embryo.
|
| Data processing |
RMAexpress
|
| |
|
| Submission date |
Feb 16, 2009 |
| Last update date |
Feb 25, 2009 |
| Contact name |
Yury Goltsev |
| E-mail(s) |
goltsev@berkeley.edu, mlevine@berkeley.edu
|
| Phone |
510 642 5007
|
| Organization name |
UC Berkeley
|
| Department |
MCB
|
| Lab |
Levine
|
| Street address |
585 LSA, UC Berkeley
|
| City |
Berkeley |
| State/province |
CA |
| ZIP/Postal code |
94720 |
| Country |
USA |
| |
|
| Platform ID |
GPL1321 |
| Series (2) |
| GSE14851 |
Gene expression in the embryonic serosa of Anopheles gambiae |
| GSE15001 |
Gene expression in the Anopheles gambiae embryo |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
log2 of signal intensity (RMA) |
| Data table |
| ID_REF |
VALUE |
| 1116_at |
4.339051263 |
| 1978_at |
3.378080015 |
| 200000_s_at |
4.85414668 |
| 200001_at |
4.207869205 |
| 200002_at |
3.596796448 |
| 200003_s_at |
5.312291597 |
| 200004_at |
3.41694921 |
| 200005_at |
4.650959406 |
| 200006_at |
3.947580671 |
| 200007_at |
4.10859829 |
| 200008_s_at |
4.735841876 |
| 200009_at |
4.478191495 |
| 200010_at |
5.121502717 |
| 200011_s_at |
3.867045582 |
| 200012_x_at |
4.025027763 |
| 200013_at |
4.149613677 |
| 200014_s_at |
3.784858246 |
| 200015_s_at |
4.005121353 |
| 200016_x_at |
4.14387553 |
| 200017_at |
4.259601245 |
Total number of rows: 22769
Table truncated, full table size 692 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM371692.CEL.gz |
2.1 Mb |
(ftp)(http) |
CEL |
| Processed data included within Sample table |
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