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Sample GSM372773 Query DataSets for GSM372773
Status Public on Apr 15, 2009
Title H3122
Sample type RNA
 
Source name human NSCLC cell line H3122
Organism Homo sapiens
Characteristics cell line: H3122
Growth protocol exponentially growing cells
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on U133A. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description gene expression from the human NSCLC cell line H3122
Data processing Data were processed with dCHIP 1.3.1
 
Submission date Feb 20, 2009
Last update date Sep 01, 2016
Contact name Thomas Zander
Organization name University Hospital Cologne
Street address Kerpenerstr. 62
City Cologne
ZIP/Postal code 50924
Country Germany
 
Platform ID GPL96
Series (1)
GSE14925 Expression data from Non small cell lung cancer cell lines
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE dCHIP 1.3.1
ABS_CALL

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 200.491 P
AFFX-BioB-M_at 180.626 P
AFFX-BioB-3_at 179.561 P
AFFX-BioC-5_at 489.378 P
AFFX-BioC-3_at 557.357 P
AFFX-BioDn-5_at 646.675 P
AFFX-BioDn-3_at 2208.67 P
AFFX-CreX-5_at 3933.63 P
AFFX-CreX-3_at 4529.1 P
AFFX-DapX-5_at 75.9419 A
AFFX-DapX-M_at 58.8495 A
AFFX-DapX-3_at 21.857 A
AFFX-LysX-5_at 10.4246 A
AFFX-LysX-M_at 165.937 A
AFFX-LysX-3_at 27.1057 A
AFFX-PheX-5_at 52.0643 A
AFFX-PheX-M_at 162.025 A
AFFX-PheX-3_at 101.448 A
AFFX-ThrX-5_at 76.6567 A
AFFX-ThrX-M_at 22.8265 A

Total number of rows: 22283

Table truncated, full table size 453 Kbytes.




Supplementary file Size Download File type/resource
GSM372773.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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