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Sample GSM372787 Query DataSets for GSM372787
Status Public on Apr 15, 2009
Title HCC2279
Sample type RNA
 
Source name human NSCLC cell line HCC2279
Organism Homo sapiens
Characteristics cell line: HCC2279
Growth protocol exponentially growing cells
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on U133A. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description gene expression from the human NSCLC cell line HCC2279
Data processing Data were processed with dCHIP 1.3.1
 
Submission date Feb 20, 2009
Last update date Sep 01, 2016
Contact name Thomas Zander
Organization name University Hospital Cologne
Street address Kerpenerstr. 62
City Cologne
ZIP/Postal code 50924
Country Germany
 
Platform ID GPL96
Series (1)
GSE14925 Expression data from Non small cell lung cancer cell lines
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE dCHIP 1.3.1
ABS_CALL

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 150.505 P
AFFX-BioB-M_at 150.501 P
AFFX-BioB-3_at 132.599 P
AFFX-BioC-5_at 329.607 P
AFFX-BioC-3_at 370.148 P
AFFX-BioDn-5_at 501.528 P
AFFX-BioDn-3_at 1833.04 P
AFFX-CreX-5_at 4267.85 P
AFFX-CreX-3_at 5009.75 P
AFFX-DapX-5_at 56.2784 A
AFFX-DapX-M_at 57.0679 A
AFFX-DapX-3_at 6.44176 A
AFFX-LysX-5_at 6.18989 A
AFFX-LysX-M_at 152.614 A
AFFX-LysX-3_at 41.0137 P
AFFX-PheX-5_at 30.566 A
AFFX-PheX-M_at 179.92 A
AFFX-PheX-3_at 54.0349 A
AFFX-ThrX-5_at 62.5016 A
AFFX-ThrX-M_at 21.305 A

Total number of rows: 22283

Table truncated, full table size 453 Kbytes.




Supplementary file Size Download File type/resource
GSM372787.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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