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Sample GSM372790 Query DataSets for GSM372790
Status Public on Apr 15, 2009
Title HCC2935
Sample type RNA
 
Source name human NSCLC cell line HCC2935
Organism Homo sapiens
Characteristics cell line: HCC2935
Growth protocol exponentially growing cells
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on U133A. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description gene expression from the human NSCLC cell line HCC2935
Data processing Data were processed with dCHIP 1.3.1
 
Submission date Feb 20, 2009
Last update date Sep 01, 2016
Contact name Thomas Zander
Organization name University Hospital Cologne
Street address Kerpenerstr. 62
City Cologne
ZIP/Postal code 50924
Country Germany
 
Platform ID GPL96
Series (1)
GSE14925 Expression data from Non small cell lung cancer cell lines
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE dCHIP 1.3.1
ABS_CALL

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 115.097 P
AFFX-BioB-M_at 98.2836 P
AFFX-BioB-3_at 109.998 P
AFFX-BioC-5_at 286.785 P
AFFX-BioC-3_at 268.864 P
AFFX-BioDn-5_at 341.499 P
AFFX-BioDn-3_at 1599.76 P
AFFX-CreX-5_at 3276.34 P
AFFX-CreX-3_at 3695.45 P
AFFX-DapX-5_at 72.2104 A
AFFX-DapX-M_at 48.2281 P
AFFX-DapX-3_at 16.1156 A
AFFX-LysX-5_at -5.00674 A
AFFX-LysX-M_at 109.728 A
AFFX-LysX-3_at 41.7737 A
AFFX-PheX-5_at 26.4086 A
AFFX-PheX-M_at 137.672 A
AFFX-PheX-3_at 48.2516 A
AFFX-ThrX-5_at 43.954 A
AFFX-ThrX-M_at 15.3441 A

Total number of rows: 22283

Table truncated, full table size 453 Kbytes.




Supplementary file Size Download File type/resource
GSM372790.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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