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Sample GSM37337

Query DataSets for GSM37337

Status

Public on Feb 03, 2005

Title

PBEC_unstimulated

Sample type

SAGE

Anchor

NlaIII

Tag Count

28602

Tag Length

Source name

primary bronchial epithelial cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

SAGE library derived from primary (unstimulated) human bronchial epithelial cells ; the RNA used for these libraries was extracted from bronchial epithelial cells derived from 7 donors.
Library was constructed at the department of Medical Pharmacology, LACDR, Leiden University Medical Center.
Keywords = epithelial cells
Keywords = bacterial infection
Keywords = inflammation

Submission date

Dec 08, 2004

Last update date

Nov 19, 2008

Contact name

Joost Vos

E-mail(s)

info@joostvos.nl

Phone

+31 20 4449998

Fax

+31 20 4448081

URL

http://www.joostvos.nl

Organization name

Vrije Universiteit Medisch Centrum

Department

Molecular Cell Biology and Immunology

Street address

Van der Boechorststraat 7

City

Amsterdam

ZIP/Postal code

1081 BT

Country

Netherlands

Platform ID

GPL4

Series (1)

GSE2056

PBECs stimulated with pro-inflammatory cytokines and P. aeruginosa

Data table header descriptions
TAG	SAGE tag sequence
COUNT	SAGE tag count
TPM	tags per million

Data table
TAG	COUNT	TPM
AAAAAAAAAA	25	874.06
AAAAAAAAAC	1	34.96
AAAAAAAAAG	1	34.96
AAAAAAAAGA	2	69.93
AAAAAAAATG	1	34.96
AAAAAAATGT	2	69.93
AAAAAACAAA	1	34.96
AAAAAACCCA	2	69.93
AAAAAACCTT	1	34.96
AAAAAACTCC	1	34.96
AAAAAATGCA	1	34.96
AAAAAATTAA	1	34.96
AAAAACAAAA	1	34.96
AAAAACAAGG	1	34.96
AAAAACAGAG	1	34.96
AAAAACCAAG	1	34.96
AAAAACCATA	5	174.81
AAAAACCCTT	1	34.96
AAAAACGCCA	1	34.96
AAAAACTTAA	1	34.96

Total number of rows: 15053

Table truncated, full table size 281 Kbytes.

Supplementary data files not provided