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Sample GSM37484 Query DataSets for GSM37484
Status Public on Mar 02, 2005
Title MIN6 cell, ACREB Forskolin 2
Sample type RNA
 
Source name Mouse pancreatic beta cell line MIN6
Organism Mus musculus
Extracted molecule total RNA
 
Description Culture of mouse MIN6 cells, infected with ACREB adenovirus, with 1hr forskolin (a cAMP agonist) treatment. ACREB is a dominant negative form of the CREB protein. RNA was extracted using the Qiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA. 2 control and 2 forskolin treated samples from GFP virus infected cells, and 2 forskolin treated samples from ACREB virus infected cells were analyzed. Data was analyzed using dChIP software (www.dchip.org).
Keywords = MIN6, cAMP induced genes, forskolin, CREB target genes
 
Submission date Dec 10, 2004
Last update date May 27, 2005
Contact name Xinmin Zhang
E-mail(s) xzhang@salk.edu
Phone 858-453-4100 x1157
Organization name Salk Institute
Street address 10010 N. Torrey Pines Rd.
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platform ID GPL81
Series (1)
GSE2060 Characterize CREB target genes in different tissue types

Data table header descriptions
ID_REF
VALUE 'expression index' a measure of the abundance of a transcript, determined using the dChip software with PM-MM models.

Data table
ID_REF VALUE
AFFX-MurIL2_at 160.759
AFFX-MurIL10_at 113.941
AFFX-MurIL4_at 37.9691
AFFX-MurFAS_at 836.005
AFFX-BioB-5_at 265.787
AFFX-BioB-M_at 266.921
AFFX-BioB-3_at 413.883
AFFX-BioC-5_at 940.963
AFFX-BioC-3_at 768.097
AFFX-BioDn-5_at 648.32
AFFX-BioDn-3_at 2705.19
AFFX-CreX-5_at 6205.76
AFFX-CreX-3_at 8619.66
AFFX-BioB-5_st 462.586
AFFX-BioB-M_st 192.803
AFFX-BioB-3_st 258.846
AFFX-BioC-5_st 803.676
AFFX-BioC-3_st 302.453
AFFX-BioDn-5_st 938.476
AFFX-BioDn-3_st 605.313

Total number of rows: 12488

Table truncated, full table size 218 Kbytes.




Supplementary file Size Download File type/resource
GSM37484.CEL.gz 2.8 Mb (ftp)(http) CEL
GSM37484.EXP.gz 260 b (ftp)(http) EXP

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