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Sample GSM37489 Query DataSets for GSM37489
Status Public on Mar 02, 2005
Title HEK293T cells, ACREB Forskolin 1
Sample type RNA
 
Source name Human HEK293T cell line
Organism Homo sapiens
Extracted molecule total RNA
 
Description Culture of human HEK293T cells, transfected with ACREB, a dominant negative form of the CREB protein, and treated with 1hr forskolin (a cAMP agonist). RNA was extracted using the Qiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA. 2 control and 2 forskolin treated samples, and 2 forskolin treated samples from ACREB transfected cells were analyzed. Data was analyzed using dChIP software (www.dchip.org).
Keywords = HEK293T, cAMP induced genes, forskolin, CREB target genes
 
Submission date Dec 10, 2004
Last update date May 27, 2005
Contact name Xinmin Zhang
E-mail(s) xzhang@salk.edu
Phone 858-453-4100 x1157
Organization name Salk Institute
Street address 10010 N. Torrey Pines Rd.
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platform ID GPL96
Series (1)
GSE2060 Characterize CREB target genes in different tissue types

Data table header descriptions
ID_REF
VALUE 'expression index' a measure of the abundance of a transcript, determined using the dChip software with PM-MM models.

Data table
ID_REF VALUE
AFFX-BioB-5_at 360.852
AFFX-BioB-M_at 358.497
AFFX-BioB-3_at 414.986
AFFX-BioC-5_at 605.31
AFFX-BioC-3_at 592.719
AFFX-BioDn-5_at 684.302
AFFX-BioDn-3_at 2186.28
AFFX-CreX-5_at 4957.57
AFFX-CreX-3_at 6921.36
AFFX-DapX-5_at 41.2942
AFFX-DapX-M_at 41.8901
AFFX-DapX-3_at 147.315
AFFX-LysX-5_at -7.34044
AFFX-LysX-M_at 164.102
AFFX-LysX-3_at 84.5941
AFFX-PheX-5_at 4.99322
AFFX-PheX-M_at 286.456
AFFX-PheX-3_at 82.0272
AFFX-ThrX-5_at 104.969
AFFX-ThrX-M_at 27.8294

Total number of rows: 22283

Table truncated, full table size 409 Kbytes.




Supplementary file Size Download File type/resource
GSM37489.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM37489.EXP.gz 345 b (ftp)(http) EXP

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