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Sample GSM37490 Query DataSets for GSM37490
Status Public on Mar 02, 2005
Title HEK293T cells, ACREB Forskolin 2
Sample type RNA
 
Source name Human HEK293T cell line
Organism Homo sapiens
Extracted molecule total RNA
 
Description Culture of human HEK293T cells, transfected with ACREB, a dominant negative form of the CREB protein, and treated with 1hr forskolin (a cAMP agonist). RNA was extracted using the Qiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA. 2 control and 2 forskolin treated samples, and 2 forskolin treated samples from ACREB transfected cells were analyzed. Data was analyzed using dChIP software (www.dchip.org).
Keywords = HEK293T, cAMP induced genes, forskolin, CREB target genes
 
Submission date Dec 10, 2004
Last update date May 27, 2005
Contact name Xinmin Zhang
E-mail(s) xzhang@salk.edu
Phone 858-453-4100 x1157
Organization name Salk Institute
Street address 10010 N. Torrey Pines Rd.
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platform ID GPL96
Series (1)
GSE2060 Characterize CREB target genes in different tissue types

Data table header descriptions
ID_REF
VALUE 'expression index' a measure of the abundance of a transcript, determined using the dChip software with PM-MM models.

Data table
ID_REF VALUE
AFFX-BioB-5_at 303.835
AFFX-BioB-M_at 340.766
AFFX-BioB-3_at 370.348
AFFX-BioC-5_at 509.194
AFFX-BioC-3_at 544.354
AFFX-BioDn-5_at 527.232
AFFX-BioDn-3_at 1703.31
AFFX-CreX-5_at 4759.03
AFFX-CreX-3_at 4895.28
AFFX-DapX-5_at 33.8101
AFFX-DapX-M_at 52.0284
AFFX-DapX-3_at 67.0061
AFFX-LysX-5_at -2.35845
AFFX-LysX-M_at 117.549
AFFX-LysX-3_at 46.9839
AFFX-PheX-5_at 18.6728
AFFX-PheX-M_at 230.552
AFFX-PheX-3_at 67.5018
AFFX-ThrX-5_at 119.746
AFFX-ThrX-M_at 22.9577

Total number of rows: 22283

Table truncated, full table size 409 Kbytes.




Supplementary file Size Download File type/resource
GSM37490.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM37490.EXP.gz 345 b (ftp)(http) EXP

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