NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM37491 Query DataSets for GSM37491
Status Public on Mar 02, 2005
Title HEK293T cells, forskolin 0hr 1
Sample type RNA
 
Source name Human HEK293T cell line
Organism Homo sapiens
Extracted molecule total RNA
 
Description Culture of human HEK293T cells, treated with forskolin for 0hr, 1hr and 4 hr. RNA was extracted using the Qiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA. Duplicates for each time point is used. Data was analyzed using dChIP software (www.dchip.org).
Keywords = HEK293T, cAMP induced genes, forskolin, CREB target genes
 
Submission date Dec 10, 2004
Last update date May 27, 2005
Contact name Xinmin Zhang
E-mail(s) xzhang@salk.edu
Phone 858-453-4100 x1157
Organization name Salk Institute
Street address 10010 N. Torrey Pines Rd.
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platform ID GPL96
Series (1)
GSE2060 Characterize CREB target genes in different tissue types

Data table header descriptions
ID_REF
VALUE 'expression index' a measure of the abundance of a transcript, determined using the dChip software with PM-MM models.

Data table
ID_REF VALUE
AFFX-BioB-5_at 100.135
AFFX-BioB-M_at 86.4385
AFFX-BioB-3_at 86.9372
AFFX-BioC-5_at 399.755
AFFX-BioC-3_at 141.541
AFFX-BioDn-5_at 190.132
AFFX-BioDn-3_at 1110.03
AFFX-CreX-5_at 2586.63
AFFX-CreX-3_at 3788.44
AFFX-DapX-5_at 107.602
AFFX-DapX-M_at 56.2041
AFFX-DapX-3_at 245.949
AFFX-LysX-5_at 27.3031
AFFX-LysX-M_at 204.469
AFFX-LysX-3_at 63.1859
AFFX-PheX-5_at 113.196
AFFX-PheX-M_at 167.188
AFFX-PheX-3_at 150.538
AFFX-ThrX-5_at 55.1805
AFFX-ThrX-M_at 38.7166

Total number of rows: 22283

Table truncated, full table size 409 Kbytes.




Supplementary file Size Download File type/resource
GSM37491.CEL.gz 3.6 Mb (ftp)(http) CEL
GSM37491.EXP.gz 258 b (ftp)(http) EXP

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap