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| Status |
Public on Jan 31, 2005 |
| Title |
HeLa transfected with miR-1 versus control transfected HeLa, 24 hours |
| Sample type |
RNA |
| |
|
| Channel 1 |
| Source name |
HeLa transfected with miR-1 duplex, 24 hours
|
| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
| |
|
| Channel 2 |
| Source name |
Mock transfected HeLa, 24 hours
|
| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
| |
|
| |
| Description |
100nM Oligofectamine transfection of duplexes as described in Lim et al., submitted to Nature, 2004
Sample author: Jason,M,Johnson
Keywords = microRNA
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| Submission date |
Dec 15, 2004 |
| Last update date |
Feb 01, 2007 |
| Contact name |
Lee Lim |
| E-mail(s) |
lee_lim@merck.com
|
| Phone |
206-802-7323
|
| Organization name |
Rosetta Inpharmatics
|
| Street address |
|
| City |
Seattle |
| State/province |
WA |
| ZIP/Postal code |
98109 |
| Country |
USA |
| |
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| Platform ID |
GPL1749 |
| Series (1) |
| GSE2075 |
Rosetta_miRNA_transfection_experiment |
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| Data table header descriptions |
| ID_REF |
Rosetta generated unique probe identifier |
| VALUE |
same as UNF_VALUE but with flagged values removed |
| ERROR |
Error estimate for LOG10 RATIO (VALUE) |
| LOG_INTENSITY |
Averaged log10 intensity of a fluor-reversed chip pair [.5 * log10(CHANNEL1*CHANNEL2), error weighted] |
| P_VALUE |
P value that the probe target is differentially expressed in the two tissues |
| FAILED_QC |
TRUE for probes which failed a quality-control measure |
| UNF_VALUE |
LOG10 RATIO: Averaged log10 ratio of a fluor-reversed chip pair [log10(CHANNEL1/CHANNEL2), error weighted] |
| Data table |
| ID_REF |
VALUE |
ERROR |
LOG_INTENSITY |
P_VALUE |
FAILED_QC |
UNF_VALUE |
| 1010423 |
0.06712 |
0.05966 |
-0.02612 |
0.26054 |
FALSE |
0.06712 |
| 1010498 |
0.17011 |
0.04908 |
0.89995 |
0.00053 |
FALSE |
0.17011 |
| 1010600 |
-0.06575 |
0.5314 |
-2.28485 |
0.90154 |
FALSE |
-0.06575 |
| 1010604 |
0.04155 |
0.04912 |
-0.07268 |
0.39759 |
FALSE |
0.04155 |
| 1010607 |
0.03073 |
0.04365 |
-0.06956 |
0.48138 |
FALSE |
0.03073 |
| 1010614 |
0.19118 |
0.05629 |
-0.90444 |
0.00068 |
FALSE |
0.19118 |
| 1010673 |
0.10205 |
0.04419 |
0.90547 |
0.02092 |
FALSE |
0.10205 |
| 1010712 |
0.01062 |
0.0557 |
-0.12312 |
0.84883 |
FALSE |
0.01062 |
| 1010719 |
-0.07132 |
0.38639 |
-2.1412 |
0.85356 |
FALSE |
-0.07132 |
| 1010720 |
-0.01562 |
0.05239 |
-0.34464 |
0.76554 |
FALSE |
-0.01562 |
| 1010724 |
0.04498 |
0.04544 |
-0.32542 |
0.32228 |
FALSE |
0.04498 |
| 1010731 |
0.05849 |
0.05975 |
1.12728 |
0.32759 |
FALSE |
0.05849 |
| 1010732 |
0.03491 |
0.04513 |
0.72475 |
0.43931 |
FALSE |
0.03491 |
| 1011137 |
-0.06137 |
0.11221 |
-1.50354 |
0.58446 |
FALSE |
-0.06137 |
| 1011161 |
0.08298 |
0.04539 |
0.54958 |
0.06754 |
FALSE |
0.08298 |
| 1011321 |
-0.06793 |
0.08521 |
-1.30067 |
0.42531 |
FALSE |
-0.06793 |
| 1011371 |
0.09701 |
0.05761 |
-0.02651 |
0.09222 |
FALSE |
0.09701 |
| 1011383 |
0.04201 |
0.16874 |
-1.7436 |
0.8034 |
FALSE |
0.04201 |
| 1011453 |
-0.08362 |
0.08106 |
-1.02112 |
0.30227 |
FALSE |
-0.08362 |
| 1011465 |
-0.00685 |
0.29113 |
-2.00665 |
0.98123 |
FALSE |
-0.00685 |
Total number of rows: 23870
Table truncated, full table size 1372 Kbytes.
| Supplementary data files not provided |
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