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| Status |
Public on Jan 31, 2005 |
| Title |
HeLa transfected with miR-124 versus control transfected HeLa, 12 hours |
| Sample type |
RNA |
| |
|
| Channel 1 |
| Source name |
HeLa transfected with miR-124 duplex, 12 hours
|
| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
| |
|
| Channel 2 |
| Source name |
Mock transfected HeLa, 12 hours
|
| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
| |
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| |
| Description |
100nM Oligofectamine transfection of duplexes as described in Lim et al., submitted to Nature, 2004
Sample author: Jason,M,Johnson
Keywords = microRNA
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| Submission date |
Dec 15, 2004 |
| Last update date |
Feb 01, 2007 |
| Contact name |
Lee Lim |
| E-mail(s) |
lee_lim@merck.com
|
| Phone |
206-802-7323
|
| Organization name |
Rosetta Inpharmatics
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| Street address |
|
| City |
Seattle |
| State/province |
WA |
| ZIP/Postal code |
98109 |
| Country |
USA |
| |
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| Platform ID |
GPL1749 |
| Series (1) |
| GSE2075 |
Rosetta_miRNA_transfection_experiment |
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| Data table header descriptions |
| ID_REF |
Rosetta generated unique probe identifier |
| VALUE |
same as UNF_VALUE but with flagged values removed |
| ERROR |
Error estimate for LOG10 RATIO (VALUE) |
| LOG_INTENSITY |
Averaged log10 intensity of a fluor-reversed chip pair [.5 * log10(CHANNEL1*CHANNEL2), error weighted] |
| P_VALUE |
P value that the probe target is differentially expressed in the two tissues |
| FAILED_QC |
TRUE for probes which failed a quality-control measure |
| UNF_VALUE |
LOG10 RATIO: Averaged log10 ratio of a fluor-reversed chip pair [log10(CHANNEL1/CHANNEL2), error weighted] |
| Data table |
| ID_REF |
VALUE |
ERROR |
LOG_INTENSITY |
P_VALUE |
FAILED_QC |
UNF_VALUE |
| 1010423 |
0.03068 |
0.05246 |
-0.10856 |
0.55871 |
FALSE |
0.03068 |
| 1010498 |
0.05071 |
0.04679 |
0.86883 |
0.2785 |
FALSE |
0.05071 |
| 1010600 |
-0.03698 |
0.86806 |
-2.52273 |
0.96602 |
FALSE |
-0.03698 |
| 1010604 |
0.01328 |
0.04536 |
-0.25236 |
0.76972 |
FALSE |
0.01328 |
| 1010607 |
0.03028 |
0.05524 |
-0.1584 |
0.58367 |
FALSE |
0.03028 |
| 1010614 |
0.00347 |
0.06066 |
-1.08237 |
0.95434 |
FALSE |
0.00347 |
| 1010673 |
0.15631 |
0.05089 |
0.93776 |
0.00213 |
FALSE |
0.15631 |
| 1010712 |
-0.00572 |
0.04833 |
-0.27037 |
0.90587 |
FALSE |
-0.00572 |
| 1010719 |
0.15059 |
0.26387 |
-1.82297 |
0.56821 |
FALSE |
0.15059 |
| 1010720 |
0.01188 |
0.04883 |
-0.30509 |
0.80772 |
FALSE |
0.01188 |
| 1010724 |
0.02077 |
0.04462 |
-0.35341 |
0.64158 |
FALSE |
0.02077 |
| 1010731 |
0.02714 |
0.06441 |
0.99132 |
0.67352 |
FALSE |
0.02714 |
| 1010732 |
0.00316 |
0.04617 |
0.71818 |
0.94543 |
FALSE |
0.00316 |
| 1011137 |
0.01203 |
0.23184 |
-1.87682 |
0.9586 |
FALSE |
0.01203 |
| 1011161 |
0.14567 |
0.04794 |
0.54195 |
0.00237 |
FALSE |
0.14567 |
| 1011321 |
0.02766 |
0.08769 |
-1.40917 |
0.75246 |
FALSE |
0.02766 |
| 1011371 |
0.07589 |
0.05015 |
-0.0024 |
0.13024 |
FALSE |
0.07589 |
| 1011383 |
0.0099 |
0.16756 |
-1.79643 |
0.95288 |
FALSE |
0.0099 |
| 1011453 |
-0.04151 |
0.1737 |
-1.17673 |
0.81112 |
FALSE |
-0.04151 |
| 1011465 |
-0.08228 |
0.10348 |
-1.33053 |
0.42654 |
FALSE |
-0.08228 |
Total number of rows: 23564
Table truncated, full table size 1353 Kbytes.
| Supplementary data files not provided |
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