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Status |
Public on Jan 31, 2005 |
Title |
HeLa transfected with chimiR-1-124 versus control transfected HeLa, 12 hours |
Sample type |
RNA |
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Channel 1 |
Source name |
HeLa transfected with chimiR-1-124 duplex, 12 hours
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Organism |
Homo sapiens |
Extracted molecule |
total RNA |
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Channel 2 |
Source name |
Mock transfected HeLa, 12 hours
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Organism |
Homo sapiens |
Extracted molecule |
total RNA |
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Description |
100nM Oligofectamine transfection of duplexes as described in Lim et al., submitted to Nature, 2004 Sample author: Jason,M,Johnson Keywords = microRNA
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Submission date |
Dec 15, 2004 |
Last update date |
Feb 01, 2007 |
Contact name |
Lee Lim |
E-mail(s) |
lee_lim@merck.com
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Phone |
206-802-7323
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Organization name |
Rosetta Inpharmatics
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Street address |
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City |
Seattle |
State/province |
WA |
ZIP/Postal code |
98109 |
Country |
USA |
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Platform ID |
GPL1749 |
Series (1) |
GSE2075 |
Rosetta_miRNA_transfection_experiment |
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Data table header descriptions |
ID_REF |
Rosetta generated unique probe identifier |
VALUE |
same as UNF_VALUE but with flagged values removed |
ERROR |
Error estimate for LOG10 RATIO (VALUE) |
LOG_INTENSITY |
Averaged log10 intensity of a fluor-reversed chip pair [.5 * log10(CHANNEL1*CHANNEL2), error weighted] |
P_VALUE |
P value that the probe target is differentially expressed in the two tissues |
FAILED_QC |
TRUE for probes which failed a quality-control measure |
UNF_VALUE |
LOG10 RATIO: Averaged log10 ratio of a fluor-reversed chip pair [log10(CHANNEL1/CHANNEL2), error weighted] |
Data table |
ID_REF |
VALUE |
ERROR |
LOG_INTENSITY |
P_VALUE |
FAILED_QC |
UNF_VALUE |
1010423 |
0.02826 |
0.05843 |
-0.78759 |
0.62864 |
FALSE |
0.02826 |
1010498 |
0.01626 |
0.04594 |
0.76999 |
0.72339 |
FALSE |
0.01626 |
1010600 |
-0.07828 |
1.334 |
-2.29335 |
0.95321 |
FALSE |
-0.07828 |
1010604 |
0.04683 |
0.05182 |
-0.24815 |
0.36617 |
FALSE |
0.04683 |
1010607 |
-0.01307 |
0.04957 |
-0.32864 |
0.79209 |
FALSE |
-0.01307 |
1010614 |
0.16295 |
0.08408 |
-1.06966 |
0.0526 |
FALSE |
0.16295 |
1010673 |
0.05873 |
0.05745 |
0.88781 |
0.30667 |
FALSE |
0.05873 |
1010712 |
-0.03199 |
0.05595 |
-0.3817 |
0.56745 |
FALSE |
-0.03199 |
1010719 |
0.09185 |
0.4992 |
-1.84076 |
0.85402 |
FALSE |
0.09185 |
1010720 |
-0.01991 |
0.04841 |
-0.23001 |
0.68089 |
FALSE |
-0.01991 |
1010724 |
0.08624 |
0.08758 |
-0.5754 |
0.3248 |
FALSE |
0.08624 |
1010731 |
0.05014 |
0.04917 |
1.03595 |
0.30791 |
FALSE |
0.05014 |
1010732 |
0.04012 |
0.05805 |
0.79269 |
0.4895 |
FALSE |
0.04012 |
1011137 |
0.00116 |
0.15525 |
-1.68557 |
0.99405 |
FALSE |
0.00116 |
1011161 |
0.08367 |
0.07327 |
0.49885 |
0.25349 |
FALSE |
0.08367 |
1011321 |
-0.02368 |
0.11706 |
-1.40714 |
0.83966 |
FALSE |
-0.02368 |
1011371 |
0.12801 |
0.07791 |
-0.21974 |
0.10038 |
FALSE |
0.12801 |
1011383 |
0.01742 |
0.28702 |
-1.96677 |
0.95161 |
FALSE |
0.01742 |
1011453 |
0.07639 |
0.09766 |
-1.32406 |
0.43412 |
FALSE |
0.07639 |
1011465 |
0.04009 |
0.38732 |
-2.0224 |
0.91755 |
FALSE |
0.04009 |
Total number of rows: 23564
Table truncated, full table size 1355 Kbytes.
Supplementary data files not provided |
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