NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM37605 Query DataSets for GSM37605
Status Public on Jan 31, 2005
Title HeLa transfected with chimiR-124-1 versus control transfected HeLa, 24 hours
Sample type RNA
 
Channel 1
Source name HeLa transfected with chimiR-124-1 duplex, 24 hours
Organism Homo sapiens
Extracted molecule total RNA
 
Channel 2
Source name Mock transfected HeLa, 24 hours
Organism Homo sapiens
Extracted molecule total RNA
 
 
Description 100nM Oligofectamine transfection of duplexes as described in Lim et al., submitted to Nature, 2004
Sample author: Jason,M,Johnson
Keywords = microRNA
 
Submission date Dec 15, 2004
Last update date Feb 01, 2007
Contact name Lee Lim
E-mail(s) lee_lim@merck.com
Phone 206-802-7323
Organization name Rosetta Inpharmatics
Street address
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platform ID GPL1749
Series (1)
GSE2075 Rosetta_miRNA_transfection_experiment

Data table header descriptions
ID_REF Rosetta generated unique probe identifier
VALUE same as UNF_VALUE but with flagged values removed
ERROR Error estimate for LOG10 RATIO (VALUE)
LOG_INTENSITY Averaged log10 intensity of a fluor-reversed chip pair [.5 * log10(CHANNEL1*CHANNEL2), error weighted]
P_VALUE P value that the probe target is differentially expressed in the two tissues
FAILED_QC TRUE for probes which failed a quality-control measure
UNF_VALUE LOG10 RATIO: Averaged log10 ratio of a fluor-reversed chip pair [log10(CHANNEL1/CHANNEL2), error weighted]

Data table
ID_REF VALUE ERROR LOG_INTENSITY P_VALUE FAILED_QC UNF_VALUE
1010423 -0.09198 0.064 -0.76975 0.15068 FALSE -0.09198
1010498 -0.1549 0.0448 0.64842 0.00055 FALSE -0.1549
1010604 -0.07367 0.05403 -0.24855 0.1727 FALSE -0.07367
1010607 -0.04385 0.05411 -0.24113 0.41773 FALSE -0.04385
1010614 -0.04632 0.074 -1.10797 0.53137 FALSE -0.04632
1010673 -0.00484 0.04703 0.87105 0.91798 FALSE -0.00484
1010712 -0.01107 0.06685 -0.4542 0.86852 FALSE -0.01107
1010719 0.15849 0.17668 -1.75269 0.36971 FALSE 0.15849
1010720 -0.10769 0.04595 -0.32991 0.0191 FALSE -0.10769
1010724 -0.10252 0.09956 -0.6229 0.30314 FALSE -0.10252
1010731 0.04414 0.04764 1.00585 0.35416 FALSE 0.04414
1010732 0.14162 0.06678 0.84653 0.03395 FALSE 0.14162
1011137 -0.22005 0.19964 -1.80497 0.27036 FALSE -0.22005
1011161 0.16977 0.09419 0.4815 0.07149 FALSE 0.16977
1011321 -0.03036 0.14327 -1.27953 0.83218 FALSE -0.03036
1011371 0.0029 0.0833 -0.21742 0.97223 FALSE 0.0029
1011383 0.1184 0.2057 -1.58897 0.56489 FALSE 0.1184
1011453 0.1948 0.08217 -1.19161 0.01776 FALSE 0.1948
1011465 0.04871 0.18149 -1.78918 0.7884 FALSE 0.04871
1011468 -0.33164 0.05688 -0.17188 5.54E-09 FALSE -0.33164

Total number of rows: 23564

Table truncated, full table size 1351 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap