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Status |
Public on Jan 31, 2005 |
Title |
HeLa transfected with chimiR-124-1 versus control transfected HeLa, 24 hours |
Sample type |
RNA |
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Channel 1 |
Source name |
HeLa transfected with chimiR-124-1 duplex, 24 hours
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Organism |
Homo sapiens |
Extracted molecule |
total RNA |
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Channel 2 |
Source name |
Mock transfected HeLa, 24 hours
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Organism |
Homo sapiens |
Extracted molecule |
total RNA |
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Description |
100nM Oligofectamine transfection of duplexes as described in Lim et al., submitted to Nature, 2004 Sample author: Jason,M,Johnson Keywords = microRNA
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Submission date |
Dec 15, 2004 |
Last update date |
Feb 01, 2007 |
Contact name |
Lee Lim |
E-mail(s) |
lee_lim@merck.com
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Phone |
206-802-7323
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Organization name |
Rosetta Inpharmatics
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Street address |
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City |
Seattle |
State/province |
WA |
ZIP/Postal code |
98109 |
Country |
USA |
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Platform ID |
GPL1749 |
Series (1) |
GSE2075 |
Rosetta_miRNA_transfection_experiment |
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Data table header descriptions |
ID_REF |
Rosetta generated unique probe identifier |
VALUE |
same as UNF_VALUE but with flagged values removed |
ERROR |
Error estimate for LOG10 RATIO (VALUE) |
LOG_INTENSITY |
Averaged log10 intensity of a fluor-reversed chip pair [.5 * log10(CHANNEL1*CHANNEL2), error weighted] |
P_VALUE |
P value that the probe target is differentially expressed in the two tissues |
FAILED_QC |
TRUE for probes which failed a quality-control measure |
UNF_VALUE |
LOG10 RATIO: Averaged log10 ratio of a fluor-reversed chip pair [log10(CHANNEL1/CHANNEL2), error weighted] |
Data table |
ID_REF |
VALUE |
ERROR |
LOG_INTENSITY |
P_VALUE |
FAILED_QC |
UNF_VALUE |
1010423 |
-0.09198 |
0.064 |
-0.76975 |
0.15068 |
FALSE |
-0.09198 |
1010498 |
-0.1549 |
0.0448 |
0.64842 |
0.00055 |
FALSE |
-0.1549 |
1010604 |
-0.07367 |
0.05403 |
-0.24855 |
0.1727 |
FALSE |
-0.07367 |
1010607 |
-0.04385 |
0.05411 |
-0.24113 |
0.41773 |
FALSE |
-0.04385 |
1010614 |
-0.04632 |
0.074 |
-1.10797 |
0.53137 |
FALSE |
-0.04632 |
1010673 |
-0.00484 |
0.04703 |
0.87105 |
0.91798 |
FALSE |
-0.00484 |
1010712 |
-0.01107 |
0.06685 |
-0.4542 |
0.86852 |
FALSE |
-0.01107 |
1010719 |
0.15849 |
0.17668 |
-1.75269 |
0.36971 |
FALSE |
0.15849 |
1010720 |
-0.10769 |
0.04595 |
-0.32991 |
0.0191 |
FALSE |
-0.10769 |
1010724 |
-0.10252 |
0.09956 |
-0.6229 |
0.30314 |
FALSE |
-0.10252 |
1010731 |
0.04414 |
0.04764 |
1.00585 |
0.35416 |
FALSE |
0.04414 |
1010732 |
0.14162 |
0.06678 |
0.84653 |
0.03395 |
FALSE |
0.14162 |
1011137 |
-0.22005 |
0.19964 |
-1.80497 |
0.27036 |
FALSE |
-0.22005 |
1011161 |
0.16977 |
0.09419 |
0.4815 |
0.07149 |
FALSE |
0.16977 |
1011321 |
-0.03036 |
0.14327 |
-1.27953 |
0.83218 |
FALSE |
-0.03036 |
1011371 |
0.0029 |
0.0833 |
-0.21742 |
0.97223 |
FALSE |
0.0029 |
1011383 |
0.1184 |
0.2057 |
-1.58897 |
0.56489 |
FALSE |
0.1184 |
1011453 |
0.1948 |
0.08217 |
-1.19161 |
0.01776 |
FALSE |
0.1948 |
1011465 |
0.04871 |
0.18149 |
-1.78918 |
0.7884 |
FALSE |
0.04871 |
1011468 |
-0.33164 |
0.05688 |
-0.17188 |
5.54E-09 |
FALSE |
-0.33164 |
Total number of rows: 23564
Table truncated, full table size 1351 Kbytes.
Supplementary data files not provided |
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