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| Status |
Public on Jan 31, 2005 |
| Title |
HeLa transfected with miR-124mut9-10 versus control transfected HeLa, 12 hours |
| Sample type |
RNA |
| |
|
| Channel 1 |
| Source name |
HeLa transfected with miR-124mut9-10 duplex, 12 hours
|
| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
| |
|
| Channel 2 |
| Source name |
Mock transfected HeLa, 12 hours
|
| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
| |
|
| |
| Description |
100nM Oligofectamine transfection of duplexes as described in Lim et al., submitted to Nature, 2004
Sample author: Jason,M,Johnson
Keywords = microRNA
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| |
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| Submission date |
Dec 15, 2004 |
| Last update date |
Feb 01, 2007 |
| Contact name |
Lee Lim |
| E-mail(s) |
lee_lim@merck.com
|
| Phone |
206-802-7323
|
| Organization name |
Rosetta Inpharmatics
|
| Street address |
|
| City |
Seattle |
| State/province |
WA |
| ZIP/Postal code |
98109 |
| Country |
USA |
| |
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| Platform ID |
GPL1749 |
| Series (1) |
| GSE2075 |
Rosetta_miRNA_transfection_experiment |
|
| Data table header descriptions |
| ID_REF |
Rosetta generated unique probe identifier |
| VALUE |
same as UNF_VALUE but with flagged values removed |
| ERROR |
Error estimate for LOG10 RATIO (VALUE) |
| LOG_INTENSITY |
Averaged log10 intensity of a fluor-reversed chip pair [.5 * log10(CHANNEL1*CHANNEL2), error weighted] |
| P_VALUE |
P value that the probe target is differentially expressed in the two tissues |
| FAILED_QC |
TRUE for probes which failed a quality-control measure |
| UNF_VALUE |
LOG10 RATIO: Averaged log10 ratio of a fluor-reversed chip pair [log10(CHANNEL1/CHANNEL2), error weighted] |
| Data table |
| ID_REF |
VALUE |
ERROR |
LOG_INTENSITY |
P_VALUE |
FAILED_QC |
UNF_VALUE |
| 1010423 |
0.04129 |
0.07956 |
-0.77871 |
0.60377 |
FALSE |
0.04129 |
| 1010498 |
0.03253 |
0.05716 |
0.74399 |
0.56926 |
FALSE |
0.03253 |
| 1010604 |
0.05252 |
0.05044 |
-0.27373 |
0.29778 |
FALSE |
0.05252 |
| 1010607 |
0.02719 |
0.04829 |
-0.31766 |
0.57339 |
FALSE |
0.02719 |
| 1010614 |
0.11909 |
0.07486 |
-0.99633 |
0.11161 |
FALSE |
0.11909 |
| 1010673 |
0.10415 |
0.04494 |
0.91098 |
0.02048 |
FALSE |
0.10415 |
| 1010712 |
0.00602 |
0.05657 |
-0.41362 |
0.9153 |
FALSE |
0.00602 |
| 1010719 |
-0.0401 |
0.2363 |
-1.80263 |
0.86525 |
FALSE |
-0.0401 |
| 1010720 |
0.00864 |
0.04796 |
-0.20741 |
0.85703 |
FALSE |
0.00864 |
| 1010724 |
0.06232 |
0.07571 |
-0.6312 |
0.41045 |
FALSE |
0.06232 |
| 1010731 |
0.03719 |
0.04446 |
1.0276 |
0.40291 |
FALSE |
0.03719 |
| 1010732 |
0.01133 |
0.05632 |
0.80316 |
0.84059 |
FALSE |
0.01133 |
| 1011137 |
-0.06208 |
0.10503 |
-1.68811 |
0.55449 |
FALSE |
-0.06208 |
| 1011161 |
0.04225 |
0.09185 |
0.47512 |
0.64554 |
FALSE |
0.04225 |
| 1011321 |
-0.05308 |
0.09551 |
-1.33209 |
0.57837 |
FALSE |
-0.05308 |
| 1011371 |
0.12194 |
0.07394 |
-0.24572 |
0.0991 |
FALSE |
0.12194 |
| 1011383 |
0.05511 |
0.1829 |
-1.61661 |
0.76318 |
FALSE |
0.05511 |
| 1011453 |
-0.01092 |
0.06462 |
-1.33262 |
0.86583 |
FALSE |
-0.01092 |
| 1011465 |
-0.06028 |
0.13308 |
-1.85336 |
0.65055 |
FALSE |
-0.06028 |
| 1011468 |
-0.01449 |
0.05362 |
-0.07176 |
0.78692 |
FALSE |
-0.01449 |
Total number of rows: 23564
Table truncated, full table size 1352 Kbytes.
| Supplementary data files not provided |
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