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Sample GSM377999 Query DataSets for GSM377999
Status Public on Mar 06, 2009
Title NCI-H1792
Sample type RNA
 
Source name Lung:NSCLC
Organism Homo sapiens
Characteristics cell line: NCI-H1792
tissue: Lung:NSCLC
k-ras dependence: independent
Extracted molecule total RNA
Extraction protocol Qiagen RNA easy kit
Label biotin
Label protocol Biotinylation of RNA with Perkin Elmer PN Biotin-11-UTP, and Biotin-11-CTP)
 
Hybridization protocol Labelled RNA was processed using a protocol from Affymetrix's GeneChip Expression Analysis Technical Manual under Eukaryotic Sample and Array Processing
Scan protocol Scanning was performed with an Affymetrix GeneChip 3000 Scanner
Description Gene expression data
Data processing Data was processed with GCOS ver 1.4
 
Submission date Mar 05, 2009
Last update date Mar 05, 2009
Contact name Patricia Greninger
E-mail(s) pgreninger@partners.org
Organization name Massachusetts General Hospital Cancer Center
Department Center for Molecular Therapeutics
Lab Settleman Lab
Street address 149 13th St
City Charlestown
State/province MA
ZIP/Postal code 02129
Country USA
 
Platform ID GPL1352
Series (1)
GSE15126 A gene expression signature associated with K-Ras addiction reveals regulators of EMT and tumor cell survival

Data table header descriptions
ID_REF
VALUE log2 GCRMA normalized values

Data table
ID_REF VALUE
1053_3p_at 8.78674
117_3p_at 2.53142
1494_3p_f_at 1.98256
1552275_3p_s_at 4.28468
1552281_3p_at 2.61585
1552296_3p_at 2.58597
1552302_3p_at 4.18997
1552311_3p_a_at 3.03988
1552321_3p_a_at 2.44601
1552340_3p_at 2.18572
1552343_3p_s_at 5.21862
1552354_3p_at 2.49338
1552476_3p_s_at 2.49348
1552480_3p_s_at 2.86247
1552504_3p_a_at 2.36325
1552518_3p_s_at 3.29589
1552528_3p_at 2.01259
1552535_3p_at 2.25438
1552566_3p_at 1.92474
1552575_3p_a_at 6.89493

Total number of rows: 52920

Table truncated, full table size 1417 Kbytes.




Supplementary file Size Download File type/resource
GSM377999.CEL.gz 4.6 Mb (ftp)(http) CEL
GSM377999.txt.gz 351.7 Kb (ftp)(http) TXT
Processed data included within Sample table

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