|
| Status |
Public on Mar 10, 2009 |
| Title |
PLN_16w_2 |
| Sample type |
RNA |
| |
|
| Channel 1 |
| Source name |
NOD
|
| Organism |
Mus musculus |
| Characteristics |
tissue type: pancreatic lymph nodes
age: 16 weeks
disease state: diabetic
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Qiagen RNeasy
|
| Label |
cy3
|
| Label protocol |
Agilent Low RNA Input Fluorescent Linear Amplification Kit
|
| |
|
| Channel 2 |
| Source name |
NOD.B10
|
| Organism |
Mus musculus |
| Characteristics |
disease state: control
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Qiagen RNeasy
|
| Label |
cy5
|
| Label protocol |
Agilent Low RNA Input Fluorescent Linear Amplification Kit
|
| |
|
| |
| Hybridization protocol |
as described in In situ Hybridization kit-plus
|
| Scan protocol |
Agilent scanner, manufacturer's protocol
|
| Description |
PLN_16w_2; VALUE=LOG10(NOD/NOD.B10)
|
| Data processing |
Agilent Feature Extraction software 8.5
|
| |
|
| Submission date |
Mar 07, 2009 |
| Last update date |
Mar 09, 2009 |
| Contact name |
Keiichi Kodama |
| E-mail(s) |
kkodama@stanford.edu
|
| Organization name |
Stanford Univeristy School of Medicine
|
| Department |
Department of Medicine, Division of Immunology & Rheumatology
|
| Lab |
Fathman
|
| Street address |
269 Campus Drive, Room 2225
|
| City |
Stanford |
| State/province |
CA |
| ZIP/Postal code |
94305-5166 |
| Country |
USA |
| |
|
| Platform ID |
GPL2872 |
| Series (1) |
| GSE15150 |
PLN tissue- and age-specific changes in gene expression during disease induction and progression in NOD mice. |
|
