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GEO accession:
Sample GSM380311
Query DataSets for GSM380311
Status
Public on Jun 01, 2009
Title
TAF4b knockout 1
Sample type
RNA
Source name
TAF4b knockout
Organism
Mus musculus
Characteristics
genotype: TAF4b knockout
Extracted molecule
total RNA
Extraction protocol
RNA was isolated using Trizol reagent
Label
biotin
Label protocol
Affymetrix Whole-transcript Sense Target Labeling Assay (Rev3)
Hybridization protocol
per instructions of GeneChip Mouse gene 1.0 ST array
Scan protocol
Affymetrix Expression Console v1.1
Description
n/a
Data processing
RMA-sketch
Submission date
Mar 13, 2009
Last update date
Mar 13, 2009
Contact name
Lindsay Lovasco
E-mail(s)
lindsay_lovasco@brown.edu
Organization name
Brown University
Department
MCB
Lab
Freiman Lab
Street address
70 Ship St.
City
Providence
State/province
RI
ZIP/Postal code
02903
Country
USA
Platform ID
GPL6246
Series (1)
GSE15228
Gene expression differences between TAF4b-KO, Het and WT ovaries at 3 weeks of age
Data table header descriptions
ID_REF
VALUE
RMA signal
Data table
ID_REF
VALUE
10344614
78.88876
10344616
6.669671
10344620
12.70217
10344622
164.6099
10344624
878.5161
10344633
1420.288
10344637
322.7084
10344653
25.02913
10344658
498.9328
10344674
14.39542
10344679
41.03141
10344707
473.7426
10344713
2967.906
10344715
13.75338
10344717
22.52704
10344719
72.72563
10344721
5.962114
10344723
1160.939
10344725
333.1541
10344741
3244.396
Total number of rows:
28266
Table truncated, full table size
493 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM380311.CEL.gz
4.2 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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