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GEO accession:
Sample GSM380319
Query DataSets for GSM380319
Status
Public on Jun 01, 2009
Title
TAF4b heterozygote 3
Sample type
RNA
Source name
TAF4b heterozygote
Organism
Mus musculus
Characteristics
genotype: TAF4b heterozygote
Extracted molecule
total RNA
Extraction protocol
RNA was isolated using Trizol reagent
Label
biotin
Label protocol
Affymetrix Whole-transcript Sense Target Labeling Assay (Rev3)
Hybridization protocol
per instructions of GeneChip Mouse gene 1.0 ST array
Scan protocol
Affymetrix Expression Console v1.1
Description
n/a
Data processing
RMA-sketch
Submission date
Mar 13, 2009
Last update date
Mar 13, 2009
Contact name
Lindsay Lovasco
E-mail(s)
lindsay_lovasco@brown.edu
Organization name
Brown University
Department
MCB
Lab
Freiman Lab
Street address
70 Ship St.
City
Providence
State/province
RI
ZIP/Postal code
02903
Country
USA
Platform ID
GPL6246
Series (1)
GSE15228
Gene expression differences between TAF4b-KO, Het and WT ovaries at 3 weeks of age
Data table header descriptions
ID_REF
VALUE
RMA signal
Data table
ID_REF
VALUE
10344614
75.07412
10344616
6.966821
10344620
14.17828
10344622
165.3889
10344624
902.1852
10344633
1341.103
10344637
354.9178
10344653
25.02913
10344658
440.7711
10344674
14.56682
10344679
39.45819
10344707
415.995
10344713
2945.163
10344715
14.31264
10344717
22.93893
10344719
73.26979
10344721
5.962114
10344723
1353.405
10344725
288.7407
10344741
3965.736
Total number of rows:
28266
Table truncated, full table size
493 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM380319.CEL.gz
4.2 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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