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Sample GSM38070 Query DataSets for GSM38070
Status Public on Jan 15, 2005
Title Omentum - 8186
Sample type RNA
 
Source name Ovary
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.4
Patient Age: 60-70
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 46-50
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 105
Prior Therapy: Chemotherapy
Presenting Symptoms: Bloating
Pathological T: 3c
Pathological N: X
Pathological M: X
Pathological Stage: Unknown
Pathological Grade: 4
Pathological Stage During or Following Multimodality Therapy: Yes
Primary Site: Ovary vs Peritoneum
Histology: Metastatic Papillary Serous Carcinoma
 
Submission date Dec 23, 2004
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 776.2 P 0.000509
AFFX-BioB-M_at 968.5 P 0.000044
AFFX-BioB-3_at 633.6 P 0.00007
AFFX-BioC-5_at 1995.6 P 0.000044
AFFX-BioC-3_at 2592.6 P 0.000081
AFFX-BioDn-5_at 4301.4 P 0.000044
AFFX-BioDn-3_at 8933.3 P 0.00006
AFFX-CreX-5_at 23550.2 P 0.000044
AFFX-CreX-3_at 29415.6 P 0.000044
AFFX-DapX-5_at 1488.3 P 0.000044
AFFX-DapX-M_at 2729.2 P 0.000446
AFFX-DapX-3_at 3455.3 P 0.000052
AFFX-LysX-5_at 200.1 P 0.000095
AFFX-LysX-M_at 266 P 0.00141
AFFX-LysX-3_at 507.7 P 0.00007
AFFX-PheX-5_at 240.2 P 0.00007
AFFX-PheX-M_at 403.3 P 0.000095
AFFX-PheX-3_at 385.8 P 0.000857
AFFX-ThrX-5_at 552.5 P 0.000095
AFFX-ThrX-M_at 675.7 P 0.000044

Total number of rows: 54675

Table truncated, full table size 1448 Kbytes.




Supplementary file Size Download File type/resource
GSM38070.CEL.gz 8.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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