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Sample GSM38104 Query DataSets for GSM38104
Status Public on Jan 15, 2005
Title Lung - 8258
Sample type RNA
 
Source name Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.5
Patient Age: 70-80
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 56
Presenting Symptoms: Persistent Cough
Presenting Symptoms: SOB
Presenting Symptoms: Weight Loss
Workplace or household smokers?: No
Pathological T: 2
Pathological N: 1
Pathological M: 0
Pathological Stage: 2B
Pathological Grade: 3
Primary Site: Lung
Histology: Adenocarcinoma, NOS
 
Submission date Dec 23, 2004
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE60486
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2081.9 P 0.00007
AFFX-BioB-M_at 3527.2 P 0.000052
AFFX-BioB-3_at 2020.3 P 0.000044
AFFX-BioC-5_at 5837.1 P 0.000044
AFFX-BioC-3_at 6741.2 P 0.000044
AFFX-BioDn-5_at 15226 P 0.000044
AFFX-BioDn-3_at 26048.2 P 0.000044
AFFX-CreX-5_at 65345.2 P 0.000052
AFFX-CreX-3_at 81099.3 P 0.000044
AFFX-DapX-5_at 1003.4 P 0.00006
AFFX-DapX-M_at 2018.9 P 0.000754
AFFX-DapX-3_at 3071.4 P 0.000044
AFFX-LysX-5_at 181.5 P 0.023929
AFFX-LysX-M_at 244.9 P 0.042962
AFFX-LysX-3_at 344.5 P 0.000297
AFFX-PheX-5_at 298.8 P 0.002556
AFFX-PheX-M_at 346.3 P 0.00321
AFFX-PheX-3_at 313 P 0.005565
AFFX-ThrX-5_at 226.8 P 0.002867
AFFX-ThrX-M_at 510.6 P 0.000169

Total number of rows: 54675

Table truncated, full table size 1451 Kbytes.




Supplementary file Size Download File type/resource
GSM38104.CEL.gz 7.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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