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Sample GSM38207 Query DataSets for GSM38207
Status Public on Jan 06, 2005
Title SAGE of skeletal muscle of adrenalectomized mice 3 hours after an IP injection with cortisol (0.1mg)
Sample type SAGE
Anchor NlaIII
Tag Count 139641
Tag Length 10
 
Source name skeletal muscle (gastrocnemius)
Organism Mus musculus
Extracted molecule total RNA
 
Description Ten mice were adrenalectomized, and received an IP injection of cortisol (0.1mg) 3h before experiment.
Gastrocnemius muscle were dissected from 10 C57BL6 male mice and pooled together.
Total RNA was isolated by Trizol.
Keywords = skeletal muscle
Keywords = glucocorticoids
 
Submission date Dec 27, 2004
Last update date Nov 19, 2008
Contact name Andre Boivin
E-mail(s) Andre.Boivin@crchul.ulaval.ca
Phone (418)-654-2296-Ext-6185
Fax (418)-654-2761
Organization name Laval University Hospital Center Research Center
Department SAGE Laboratory
Lab Mol. Endocrinol. & Oncology Res. Center, Laval University
Street address 2705 Boul. Laurier
City Quebec City
State/province Quebec
ZIP/Postal code G1V 4G2
Country Canada
 
Platform ID GPL11
Series (1)
GSE2122 Skeletal muscle of glucocorticoid deprived and treated mice by SAGE

Data table header descriptions
TAG
COUNT
TPM tags per million
PERCENT

Data table
TAG COUNT TPM PERCENT
GTGATGCTAA 3365 24097.51 2.409751
CCTACAGTTG 3336 23889.83 2.388983
GCTGCCCTCC 3199 22908.74 2.290874
GAGCAGACCG 3099 22192.62 2.219262
GAGGGCCGGA 2999 21476.50 2.147650
AAGATCAAGA 2878 20609.99 2.060999
ACTGTCCGGG 2618 18748.08 1.874808
TGACAGAAGA 2511 17981.82 1.798182
CCTACTAACC 1814 12990.45 1.299045
ATTGACGTGG 1751 12539.30 1.253930
CATCTTCAGC 1524 10913.70 1.091370
ATGACTGATA 1419 10161.77 1.016177
GCCTCCAAGG 1394 9982.74 0.998274
GGTGCCAACT 1348 9653.33 0.965333
AAGAAGGTAA 1147 8213.92 0.821392
AGCAGTCCCC 1108 7934.63 0.793463
AAAGTCATTG 1069 7655.34 0.765534
GTGGCTCACA 754 5399.56 0.539956
TGGGCCACCT 750 5370.92 0.537092
AGGACAAATA 739 5292.14 0.529214

Total number of rows: 30091

Table truncated, full table size 805 Kbytes.




Supplementary data files not provided

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