|
| Status |
Public on Sep 14, 2021 |
| Title |
CRS4O |
| Sample type |
RNA |
| |
|
| Source name |
ZT-4-SICK
|
| Organism |
Mus musculus |
| Characteristics |
strain: NZB/W F1
tissue: kidney
diagnosis: nephritis
time point: ZT-4
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Data processing |
The data were normalised using quantile normalisation with Illumina Genomestudio
|
| |
|
| Submission date |
May 29, 2019 |
| Last update date |
Sep 14, 2021 |
| Contact name |
Weijia Zhang |
| E-mail(s) |
weijia.zhang@mssm.edu
|
| Organization name |
Icahn School of Medicine at Mount Sinai
|
| Department |
Renal
|
| Lab |
Bioinfomatics
|
| Street address |
1 Gustave L. Levy Pl
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10029 |
| Country |
USA |
| |
|
| Platform ID |
GPL6885 |
| Series (2) |
| GSE131892 |
Renal circadian rhythm dysregulation in lupus nephritis [array] |
| GSE131894 |
Renal circadian rhythm dysregulation in lupus nephritis |
|
