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Sample GSM3832 Query DataSets for GSM3832
Status Public on Jul 05, 2003
Title bmDC (LPS treated)
Sample type SAGE
Anchor NlaIII
Tag Count 13073
Tag Length 10
 
Source name Murine bone marrow derived dendritic cells (LPS treated)
Organism Mus musculus
Extracted molecule total RNA
 
Description CBA/Ca bone marrow was cultured in the presence of GM-CSF for 6 days to generate dendritic cells, and treated with bacterial derived LPS for overnight.
 
Submission date Feb 04, 2003
Last update date Nov 19, 2008
Contact name Steve Cobbold
E-mail(s) stephen.cobbold@path.ox.ac.uk
Phone +44-(0)1865-275504
Fax +44-(0)1865-275501
URL http://www.molbiol.ox.ac.uk/pathology/tig/welcome.html
Organization name University of Oxford
Department Sir William Dunn School of Pathology
Lab Therapeutic Immunology Group
Street address South Parks Road
City Oxford
State/province Oxfordshire
ZIP/Postal code OX1 3RE
Country United Kingdom
 
Platform ID GPL11
Series (1)
GSE1316 IL-10-conditioned dendritic cells elicit innate inflammatory gene products in response to danger signals

Data table header descriptions
TAG 10 base pair SAGE Tag
COUNT Absolute count of each Tag in library
TPM tags per million

Data table
TAG COUNT TPM
TTGGTGAAGG 305 23330.53
CCTTGCTCAA 127 9714.68
TCAGGCTGCC 106 8108.31
GTTCAAGTGA 105 8031.82
GATACTTGGA 96 7343.38
GTGGCTCACA 89 6807.92
AAGATCTCTG 83 6348.96
AAGATCAAGA 79 6042.99
ACAAACTTAG 73 5584.03
AGGCAGACAG 73 5584.03
CCCTGGGTTC 68 5201.56
CCCTGAGTCC 60 4589.61
TCCTGAAGGT 53 4054.16
GCCTTTATGA 49 3748.18
AAACTTGTCT 48 3671.69
GATTGAGAAT 44 3365.72
CCTACCAAGA 43 3289.22
TTCTGCTTTT 43 3289.22
GTTTCAACAT 42 3212.73
TGGCTCGGTC 42 3212.73

Total number of rows: 6428

Table truncated, full table size 121 Kbytes.




Supplementary data files not provided

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