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Status |
Public on Mar 20, 2009 |
Title |
SAGE_Brain_meningioma_grade_I_B_SF4465 |
Sample type |
SAGE |
Anchor |
NlaIII
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Tag Count |
54647 |
Tag Length |
10 |
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Source name |
brain, meningioma, grade i, benign hyperplasia, bulk, short sage
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Organism |
Homo sapiens |
Characteristics |
organ/tissue: brain tissue preparation: bulk sex: unknown cell type: benign meningioma of the meningothelial subtype
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Biomaterial provider |
Brain Tumor Tissue Bank, University of California, San Francisco
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Extracted molecule |
total RNA |
Extraction protocol |
N/A
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Description |
CGAP_Numeric_library_ID: 525 Tagging_enzyme: BsmF I Library_producer: Anita Lal Laboratory: Meningioma Research Laboratory, UCSF
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Submission date |
Mar 19, 2009 |
Last update date |
Mar 20, 2009 |
Contact name |
Cancer Genome Anatomy Project CGAP |
E-mail(s) |
cgapbs-r@mail.nih.gov
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Phone |
301-496-1550
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URL |
http://cgap.nci.nih.gov/
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Organization name |
National Cancer Institute
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Department |
Cancer Genome Anatomy Project
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Street address |
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City |
Bethesda |
State/province |
MD |
ZIP/Postal code |
20852 |
Country |
USA |
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Platform ID |
GPL4 |
Series (2) |
GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
GSE15309 |
Cancer Genome Anatomy Project (CGAP) Human SAGE |
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Data table header descriptions |
TAG |
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COUNT |
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TPM |
tags per million |
Data table |
TAG |
COUNT |
TPM |
AAAAAAAAGA |
1 |
18.30 |
AAAAAAACCC |
4 |
73.20 |
AAAAAAAGAC |
1 |
18.30 |
AAAAAAATAG |
1 |
18.30 |
AAAAAACATA |
1 |
18.30 |
AAAAAACCCA |
4 |
73.20 |
AAAAAACTCC |
5 |
91.50 |
AAAAAACTTA |
1 |
18.30 |
AAAAAAGCAT |
1 |
18.30 |
AAAAAATCGA |
1 |
18.30 |
AAAAAATGGA |
1 |
18.30 |
AAAAAATTTG |
1 |
18.30 |
AAAAACCAGG |
1 |
18.30 |
AAAAACCCTC |
1 |
18.30 |
AAAAACGCCA |
1 |
18.30 |
AAAAACTAAC |
1 |
18.30 |
AAAAACTCAC |
1 |
18.30 |
AAAAAGCAAG |
1 |
18.30 |
AAAAAGCAGA |
10 |
182.99 |
AAAAAGCCGA |
1 |
18.30 |
Total number of rows: 19464
Table truncated, full table size 363 Kbytes.
Supplementary data files not provided |
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