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Status
Public on Mar 20, 2009
Title
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES1
Sample type
SAGE
Anchor
NlaIII
Tag Count
151735
Tag Length
10
Source name
embryonic stem cell, normal, cell line, short sage, female, h9, wa09, mef
Organism
Homo sapiens
Characteristics
organ/tissue: stem cell tissue preparation: cell line age: passage 38 sex: female
Biomaterial provider
Jamie Thomson
Extracted molecule
total RNA
Extraction protocol
N/A
Description
CGAP_Numeric_library_ID: 844 Tagging_enzyme: BsmF I Library_producer: Jas Khattra, Gene Expression Lab Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL4
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15309
Cancer Genome Anatomy Project (CGAP) Human SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
546
3598.38
AAAAAAAAAC
1
6.59
AAAAAAAAAG
8
52.72
AAAAAAAAAT
1
6.59
AAAAAAAACA
1
6.59
AAAAAAAACT
1
6.59
AAAAAAAAGA
8
52.72
AAAAAAAAGG
4
26.36
AAAAAAAATA
2
13.18
AAAAAAAATC
3
19.77
AAAAAAACAG
1
6.59
AAAAAAAGAA
7
46.13
AAAAAAAGAG
2
13.18
AAAAAAAGAT
1
6.59
AAAAAAAGCA
1
6.59
AAAAAAAGGA
1
6.59
AAAAAAAGGT
1
6.59
AAAAAAAGTA
2
13.18
AAAAAAATAA
1
6.59
AAAAAAATCA
3
19.77
Total number of rows: 37099 Table truncated, full table size 668 Kbytes .Supplementary data files not provided