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| Status |
Public on Mar 20, 2009 |
| Title |
SAGE_GallBladder_Adenocarcinoma_B_C01 |
| Sample type |
SAGE |
| Anchor |
NlaIII
|
| Tag Count |
81380 |
| Tag Length |
10 |
| |
|
| Source name |
gall bladder, bulk, adenocarcinoma, cancer, adult, male, long sage
|
| Organism |
Homo sapiens |
| Characteristics |
organ/tissue: other
tissue preparation: bulk
age: 60
sex: male
cell type: Adenocarcinoma
|
| Biomaterial provider |
CHTN
|
| Extracted molecule |
total RNA |
| Extraction protocol |
N/A
|
| |
|
| Description |
CGAP_Numeric_library_ID: 2134
Tagging_enzyme: Mme I
Library_producer: Dr. Hector Alvarez
Laboratory: Dr. Gregory Riggins and Dr. Anirban Maitra
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| |
|
| Submission date |
Mar 19, 2009 |
| Last update date |
Mar 20, 2009 |
| Contact name |
Cancer Genome Anatomy Project CGAP |
| E-mail(s) |
cgapbs-r@mail.nih.gov
|
| Phone |
301-496-1550
|
| URL |
http://cgap.nci.nih.gov/
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| Organization name |
National Cancer Institute
|
| Department |
Cancer Genome Anatomy Project
|
| Street address |
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20852 |
| Country |
USA |
| |
|
| Platform ID |
GPL4 |
| Series (2) |
| GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
| GSE15309 |
Cancer Genome Anatomy Project (CGAP) Human SAGE |
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| Data table header descriptions |
| TAG |
|
| COUNT |
|
| TPM |
tags per million |
| Data table |
| TAG |
COUNT |
TPM |
| AAAAAAAAAA |
49 |
602.11 |
| AAAAAAAAAG |
2 |
24.58 |
| AAAAAAAACT |
1 |
12.29 |
| AAAAAAAAGA |
9 |
110.59 |
| AAAAAAAAGG |
2 |
24.58 |
| AAAAAAAATA |
1 |
12.29 |
| AAAAAAAATC |
3 |
36.86 |
| AAAAAAACAT |
1 |
12.29 |
| AAAAAAACTG |
1 |
12.29 |
| AAAAAAAGAA |
1 |
12.29 |
| AAAAAAAGCA |
1 |
12.29 |
| AAAAAAAGCT |
1 |
12.29 |
| AAAAAAAGGA |
1 |
12.29 |
| AAAAAAAGTT |
1 |
12.29 |
| AAAAAAATAC |
1 |
12.29 |
| AAAAAAATCA |
2 |
24.58 |
| AAAAAAATGG |
1 |
12.29 |
| AAAAAAATTT |
2 |
24.58 |
| AAAAAACCCA |
21 |
258.05 |
| AAAAAACCCG |
1 |
12.29 |
Total number of rows: 29318
Table truncated, full table size 546 Kbytes.
| Supplementary data files not provided |
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