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GEO accession:
Sample GSM383918
Query DataSets for GSM383918
Status
Public on Mar 20, 2009
Title
SAGE_Lymph_Node_normal_B_1
Sample type
SAGE
Anchor
NlaIII
Tag Count
99426
Tag Length
10
Source name
lymph node, normal, bulk, short sage
Organism
Homo sapiens
Characteristics
organ/tissue: lymph node
tissue preparation: bulk
sex: unknown
Extracted molecule
total RNA
Extraction protocol
N/A
Description
CGAP_Numeric_library_ID: 405
Tagging_enzyme: BsmF I
Library_producer: Robert M. Beaty
Laboratory: Gregory Riggins, Duke University Medical Center
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL4
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15309
Cancer Genome Anatomy Project (CGAP) Human SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
342
3439.74
AAAAAAAAAG
7
70.40
AAAAAAAAAT
3
30.17
AAAAAAAACA
1
10.06
AAAAAAAAGA
15
150.87
AAAAAAAAGC
1
10.06
AAAAAAAATT
1
10.06
AAAAAAACAG
1
10.06
AAAAAAACTA
1
10.06
AAAAAAACTC
3
30.17
AAAAAAAGAA
1
10.06
AAAAAAAGGC
1
10.06
AAAAAAAGTT
1
10.06
AAAAAAATAA
4
40.23
AAAAAAATCA
1
10.06
AAAAAAATGA
4
40.23
AAAAAAATGC
1
10.06
AAAAAAATTA
1
10.06
AAAAAAATTT
3
30.17
AAAAAACAAA
1
10.06
Total number of rows:
39159
Table truncated, full table size
729 Kbytes
.
Supplementary data files not provided
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