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Status
Public on Mar 20, 2009
Title
SAGE_Ovary_normal_CS_HOSE_4
Sample type
SAGE
Anchor
NlaIII
Tag Count
47728
Tag Length
10
Source name
ovary, epithelium, normal, non-normalized, short sage, short term culture
Organism
Homo sapiens
Characteristics
organ/tissue: ovary tissue preparation: short term culture sex: unknown cell type: normal surface epithelium
Biomaterial provider
Patrice J. Morin
Extracted molecule
total RNA
Extraction protocol
N/A
Description
CGAP_Numeric_library_ID: 20 Tagging_enzyme: BsmF I Old_library_name: SAGE_HOSE_4 Laboratory: Pat Morin, National Institute on Aging, NIH References: C. D. Hough et al., Cancer Res 60, 6281-7 (2000) [PUBMED=11103784]
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL4
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15309
Cancer Genome Anatomy Project (CGAP) Human SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
131
2744.72
AAAAAAAAAC
1
20.95
AAAAAAAAAG
3
62.86
AAAAAAAAAT
2
41.90
AAAAAAAAGA
2
41.90
AAAAAAAATA
1
20.95
AAAAAAAATG
1
20.95
AAAAAAACCC
1
20.95
AAAAAAATAA
1
20.95
AAAAAAATCA
1
20.95
AAAAAAATGC
1
20.95
AAAAAACAAA
1
20.95
AAAAAACATT
1
20.95
AAAAAACCCA
7
146.66
AAAAAACTAC
1
20.95
AAAAAACTCA
1
20.95
AAAAAAGATT
1
20.95
AAAAAATAAC
1
20.95
AAAAAATCCC
2
41.90
AAAAAATGGT
2
41.90
Total number of rows: 15994 Table truncated, full table size 298 Kbytes .Supplementary data files not provided