GEO help: Mouse over screen elements for information.
Status
Public on Mar 20, 2009
Title
LSAGE_Eye_Retinoblastoma_B_hs0389
Sample type
SAGE
Anchor
NlaIII
Tag Count
12434232
Tag Length
17
Source name
eye, cancer, bulk, retinoblastoma, long sage, slx-sage, solexa sage, female
Organism
Homo sapiens Characteristics
organ/tissue: eye
Biomaterial provider
Arupa Ganguly, University of Pennsylvania
Extracted molecule
total RNA
Extraction protocol
N/A
Description
CGAP_Numeric_library_ID: 2424
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov Phone
301-496-1550
URL
http://cgap.nci.nih.gov/ Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL1485 Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15314 Cancer Genome Anatomy Project (CGAP) Human Solexa LongSAGE
Data table header descriptions TAG COUNT TPM tags per million
Data table TAG COUNT TPM AAAAAAAAAAAAAAAAA
80760
6494.97
AAAAAAAAAAAAAAAAC
522
41.98
AAAAAAAAAAAAAAAAG
125
10.05
AAAAAAAAAAAAAAAAT
565
45.44
AAAAAAAAAAAAAAACA
178
14.32
AAAAAAAAAAAAAAACC
45
3.62
AAAAAAAAAAAAAAACT
17
1.37
AAAAAAAAAAAAAAAGA
89
7.16
AAAAAAAAAAAAAAAGC
16
1.29
AAAAAAAAAAAAAAAGG
5
0.40
AAAAAAAAAAAAAAAGT
7
0.56
AAAAAAAAAAAAAAATA
75
6.03
AAAAAAAAAAAAAAATC
95
7.64
AAAAAAAAAAAAAAATG
7
0.56
AAAAAAAAAAAAAAATT
19
1.53
AAAAAAAAAAAAAACAA
157
12.63
AAAAAAAAAAAAAACAC
17
1.37
AAAAAAAAAAAAAACAG
4
0.32
AAAAAAAAAAAAAACAT
7
0.56
AAAAAAAAAAAAAACCA
4
0.32
331358 8169 Kbytes .Supplementary data files not provided
