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| Status |
Public on Mar 20, 2009 |
| Title |
LSAGE_GallBladder_Adenocarcinoma_B_NAM01 |
| Sample type |
SAGE |
| Anchor |
NlaIII
|
| Tag Count |
78548 |
| Tag Length |
17 |
| |
|
| Source name |
gall bladder, bulk, adenocarcinoma, tubular, cancer, adult, female, long sage
|
| Organism |
Homo sapiens |
| Characteristics |
organ/tissue: other
tissue preparation: bulk
age: 43
sex: female
cell type: Adenocarcinoma, tubular
|
| Biomaterial provider |
Dr. JC Roa, University of La Frontera, Temuco, Chile
|
| Extracted molecule |
total RNA |
| Extraction protocol |
N/A
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| |
|
| Description |
CGAP_Numeric_library_ID: 2131
Tagging_enzyme: Mme I
Library_producer: Dr. Hector Alvarez
Laboratory: Dr. Gregory Riggins and Dr. Anirban Maitra
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| |
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| Submission date |
Mar 19, 2009 |
| Last update date |
Mar 20, 2009 |
| Contact name |
Cancer Genome Anatomy Project CGAP |
| E-mail(s) |
cgapbs-r@mail.nih.gov
|
| Phone |
301-496-1550
|
| URL |
http://cgap.nci.nih.gov/
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| Organization name |
National Cancer Institute
|
| Department |
Cancer Genome Anatomy Project
|
| Street address |
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20852 |
| Country |
USA |
| |
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| Platform ID |
GPL1485 |
| Series (2) |
| GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
| GSE1902 |
Cancer Genome Anatomy Project (CGAP) Human LongSAGE |
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| Data table header descriptions |
| TAG |
|
| COUNT |
|
| TPM |
tags per million |
| Data table |
| TAG |
COUNT |
TPM |
| AAAAAAAAAAAAAAAAA |
42 |
534.70 |
| AAAAAAAAAAAAAAAAC |
1 |
12.73 |
| AAAAAAAAAAAAAAAAG |
2 |
25.46 |
| AAAAAAAAAAAAAAAAT |
2 |
25.46 |
| AAAAAAAAAAAAAAAGA |
1 |
12.73 |
| AAAAAAAAAAATTACCA |
1 |
12.73 |
| AAAAAAAAAATCTTGCA |
1 |
12.73 |
| AAAAAAAAAGAAAAAAA |
1 |
12.73 |
| AAAAAAAACAAAAAAAA |
1 |
12.73 |
| AAAAAAAACAATTTTAT |
1 |
12.73 |
| AAAAAAAAGAAAAAAAT |
1 |
12.73 |
| AAAAAAAAGAACTTTTG |
1 |
12.73 |
| AAAAAAAAGAAGTTTTG |
3 |
38.19 |
| AAAAAAAAGGCATCAAC |
1 |
12.73 |
| AAAAAAAGAAAAAAAAA |
2 |
25.46 |
| AAAAAAAGCAAATTTCA |
1 |
12.73 |
| AAAAAACATTACGGGAG |
1 |
12.73 |
| AAAAAACCCAACCCAGA |
10 |
127.31 |
| AAAAAACCCAACCCATA |
1 |
12.73 |
| AAAAAACCTAACCCCCT |
1 |
12.73 |
Total number of rows: 34989
Table truncated, full table size 890 Kbytes.
| Supplementary data files not provided |
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