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Status
Public on Mar 20, 2009
Title
LSAGE_Lymph_Node_Lymphoma_B_1
Sample type
SAGE
Anchor
NlaIII
Tag Count
72008
Tag Length
17
Source name
lymph node, b cell lymphoma, non-normalized, long sage, bulk
Organism
Homo sapiens
Characteristics
organ/tissue: lymph node tissue preparation: bulk age: 52 sex: male cell type: Large B cell Lymphoma, Malignant, high grade, involving the serosa of the appendix
Biomaterial provider
Ambion
Extracted molecule
total RNA
Extraction protocol
N/A
Description
CGAP_Numeric_library_ID: 1864 Tagging_enzyme: Mme I Library_producer: Jennifer B. Edwards Laboratory: Dr. Gregory Riggins
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL1485
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE1902
Cancer Genome Anatomy Project (CGAP) Human LongSAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAAAAAAAAA
10
138.87
AAAAAAAAAAAAAAAAT
1
13.89
AAAAAAAAAAAAAGTCA
1
13.89
AAAAAAAAAAAAATCTA
1
13.89
AAAAAAAAAAAATAAAA
1
13.89
AAAAAAAAAAAGAAAAA
1
13.89
AAAAAAAAAGCCTCAAC
1
13.89
AAAAAAAAGAAGTTTTG
4
55.55
AAAAAAAAGAGGTTTTG
1
13.89
AAAAAAAAGCCCCCCCC
1
13.89
AAAAAAAAGGCATCAAC
1
13.89
AAAAAAAATATTATTCA
1
13.89
AAAAAAAATCTTGCACT
1
13.89
AAAAAAAATGAAGTAGG
4
55.55
AAAAAAAGAAGTTTTGG
1
13.89
AAAAAAAGAGCCATAGT
1
13.89
AAAAAAAGGCATATGGA
1
13.89
AAAAAAAGGTGTTTATT
1
13.89
AAAAAAAGTTAATGGCT
1
13.89
AAAAAAAGTTGTGTTGA
1
13.89
Total number of rows: 25903 Table truncated, full table size 659 Kbytes .Supplementary data files not provided