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Sample GSM384135 Query DataSets for GSM384135
Status Public on Mar 20, 2009
Title LSAGE_Skin_Normal_B_hs0271
Sample type SAGE
Anchor NlaIII
Tag Count 5807686
Tag Length 17
 
Source name skin, normal, bulk, long sage, slx-sage, solexa sage, male
Organism Homo sapiens
Characteristics organ/tissue: skin
tissue preparation: bulk
sex: male
other information: SLX-SAGE
Biomaterial provider Youwen Zhou, University of British Columbia
Extracted molecule total RNA
Extraction protocol N/A
 
Description CGAP_Numeric_library_ID: 2263
Tagging_enzyme: Mme I
Library_producer: Martin Hirst, Functional Genomics Lab
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, Canada
 
Submission date Mar 19, 2009
Last update date Mar 20, 2009
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL1485
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15314 Cancer Genome Anatomy Project (CGAP) Human Solexa LongSAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAAAAAAAAA 29807 5132.34
AAAAAAAAAAAAAAAAC 2711 466.80
AAAAAAAAAAAAAAAAG 554 95.39
AAAAAAAAAAAAAAAAT 3445 593.18
AAAAAAAAAAAAAAACA 322 55.44
AAAAAAAAAAAAAAACC 287 49.42
AAAAAAAAAAAAAAACT 149 25.66
AAAAAAAAAAAAAAAGA 136 23.42
AAAAAAAAAAAAAAAGC 94 16.19
AAAAAAAAAAAAAAAGG 40 6.89
AAAAAAAAAAAAAAAGT 39 6.72
AAAAAAAAAAAAAAATA 371 63.88
AAAAAAAAAAAAAAATC 578 99.52
AAAAAAAAAAAAAAATG 81 13.95
AAAAAAAAAAAAAAATT 221 38.05
AAAAAAAAAAAAAACAA 226 38.91
AAAAAAAAAAAAAACAC 84 14.46
AAAAAAAAAAAAAACAG 16 2.75
AAAAAAAAAAAAAACAT 53 9.13
AAAAAAAAAAAAAACCA 16 2.75

Total number of rows: 382357

Table truncated, full table size 9383 Kbytes.




Supplementary data files not provided

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