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Status
Public on Mar 20, 2009
Title
LSAGE_Skin_Normal_B_hs0271
Sample type
SAGE
Anchor
NlaIII
Tag Count
5807686
Tag Length
17
Source name
skin, normal, bulk, long sage, slx-sage, solexa sage, male
Organism
Homo sapiens
Characteristics
organ/tissue: skin tissue preparation: bulk sex: male other information: SLX-SAGE
Biomaterial provider
Youwen Zhou, University of British Columbia
Extracted molecule
total RNA
Extraction protocol
N/A
Description
CGAP_Numeric_library_ID: 2263 Tagging_enzyme: Mme I Library_producer: Martin Hirst, Functional Genomics Lab Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, Canada
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL1485
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15314
Cancer Genome Anatomy Project (CGAP) Human Solexa LongSAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAAAAAAAAA
29807
5132.34
AAAAAAAAAAAAAAAAC
2711
466.80
AAAAAAAAAAAAAAAAG
554
95.39
AAAAAAAAAAAAAAAAT
3445
593.18
AAAAAAAAAAAAAAACA
322
55.44
AAAAAAAAAAAAAAACC
287
49.42
AAAAAAAAAAAAAAACT
149
25.66
AAAAAAAAAAAAAAAGA
136
23.42
AAAAAAAAAAAAAAAGC
94
16.19
AAAAAAAAAAAAAAAGG
40
6.89
AAAAAAAAAAAAAAAGT
39
6.72
AAAAAAAAAAAAAAATA
371
63.88
AAAAAAAAAAAAAAATC
578
99.52
AAAAAAAAAAAAAAATG
81
13.95
AAAAAAAAAAAAAAATT
221
38.05
AAAAAAAAAAAAAACAA
226
38.91
AAAAAAAAAAAAAACAC
84
14.46
AAAAAAAAAAAAAACAG
16
2.75
AAAAAAAAAAAAAACAT
53
9.13
AAAAAAAAAAAAAACCA
16
2.75
Total number of rows: 382357 Table truncated, full table size 9383 Kbytes .Supplementary data files not provided