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GEO accession:
Sample GSM384147
Query DataSets for GSM384147
Status
Public on Mar 20, 2009
Title
LSAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC1
Sample type
SAGE
Anchor
NlaIII
Tag Count
77759
Tag Length
17
Source name
vascular, normal, endothelium, antibody purified, long sage, adult
Organism
Homo sapiens
Characteristics
organ/tissue: vascular
tissue preparation: antibody purified
age: 39
sex: unknown
cell type: normal liver
Extracted molecule
total RNA
Extraction protocol
N/A
Description
CGAP_Numeric_library_ID: 655
Tagging_enzyme: Mme I
Library_producer: Brad St. Croix
Laboratory: Johns Hopkins Molecular Genetics Laboratory (Victor Velculescu)
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL1485
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE1902
Cancer Genome Anatomy Project (CGAP) Human LongSAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAAAAAAAAA
17
218.62
AAAAAAAAAAAAAAAAG
3
38.58
AAAAAAAAAAAAAAAAT
2
25.72
AAAAAAAAAAAAAAACG
1
12.86
AAAAAAAAAAAAAAAGA
1
12.86
AAAAAAAAAAAAAAAGG
1
12.86
AAAAAAAAAAAAAAATG
1
12.86
AAAAAAAAAAAAAACAA
1
12.86
AAAAAAAAAAAAAACTT
1
12.86
AAAAAAAAAAAAAAGAA
1
12.86
AAAAAAAAAAAAAAGAT
1
12.86
AAAAAAAAAAGAAAAAC
1
12.86
AAAAAAAAAGAAAAAAA
2
25.72
AAAAAAAAAGAAAAACT
1
12.86
AAAAAAAAATAGAAAAT
1
12.86
AAAAAAAAATCAAATTT
1
12.86
AAAAAAAAGAAGTTTTG
3
38.58
AAAAAAAAGGAGTTTTG
1
12.86
AAAAAAAATTTTATTGT
1
12.86
AAAAAAACCCCTTTGGC
1
12.86
Total number of rows:
38423
Table truncated, full table size
977 Kbytes
.
Supplementary data files not provided
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