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Sample GSM384153 Query DataSets for GSM384153
Status Public on Mar 20, 2009
Title LSAGE White Blood Cells monocyte depleted mononuclear cells normal AP P1
Sample type SAGE
Anchor NlaIII
Tag Count 51634
Tag Length 17
 
Source name white blood cell, monocyte-depleted mononuclear cells, normal, antibody purified, male, adult, long sage
Organism Homo sapiens
Characteristics organ/tissue: white blood cells
tissue preparation: antibody purified
age: 71
sex: male
cell type: monocyte-depleted mononuclear cells
mutations: none
Extracted molecule total RNA
Extraction protocol N/A
 
Description CGAP_Numeric_library_ID: 1568
Tagging_enzyme: Mme I
Library_producer: Willmar D. Patino, Cardiovascular Branch-NHLBI
Laboratory: Paul M. Hwang, Cardiovascular Branch-NHLBI
References: W. D. Patino et al., Proc Natl Acad Sci U S A 102, 3423-3428 (2005) [PUBMED=15728378]
 
Submission date Mar 19, 2009
Last update date Mar 24, 2011
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL1485
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE1902 Cancer Genome Anatomy Project (CGAP) Human LongSAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAAAAAAAAA 6 116.20
AAAAAAAAAAAAAAAAC 2 38.73
AAAAAAAAAAAAAAAAG 2 38.73
AAAAAAAAAAAAAAAAT 4 77.47
AAAAAAAAAAAAAAACT 1 19.37
AAAAAAAAAAAAAAATT 1 19.37
AAAAAAAAAAAGAAAAA 1 19.37
AAAAAAAAAACTCCACT 1 19.37
AAAAAAAAAATTTAAAG 1 19.37
AAAAAAAAAGAAGTTTT 1 19.37
AAAAAAAAGAAGGTTGG 1 19.37
AAAAAAAAGAAGTTTTG 4 77.47
AAAAAAAATAAACAGGC 1 19.37
AAAAAAAATTTTATTGT 1 19.37
AAAAAAAGGGGTTTACG 1 19.37
AAAAAAAGGGGTTTATT 2 38.73
AAAAAAAGGTTCTCTGG 1 19.37
AAAAAAAGTTGTGTTGG 1 19.37
AAAAAAATCAAATTTTT 4 77.47
AAAAAAATCACATAGGA 1 19.37

Total number of rows: 23273

Table truncated, full table size 592 Kbytes.




Supplementary data files not provided

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