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Status
Public on Mar 20, 2009
Title
LSAGE_White_Blood_Cells_monocytes_normal_AP_P2
Sample type
SAGE
Anchor
NlaIII
Tag Count
54426
Tag Length
17
Source name
white blood cell, monocyte, normal, antibody purified, female, adult, long sage
Organism
Homo sapiens
Characteristics
organ/tissue: white blood cells tissue preparation: antibody purified age: 72 sex: female cell type: monocyte mutations: none
Extracted molecule
total RNA
Extraction protocol
N/A
Description
CGAP_Numeric_library_ID: 1563 Tagging_enzyme: Mme I Library_producer: Willmar D. Patino, Cardiovascular Branch-NHLBI Laboratory: Paul M. Hwang, Cardiovascular Branch-NHLBI References: W. D. Patino et al., Proc Natl Acad Sci U S A 102, 3423-3428 (2005) [PUBMED=15728378]
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL1485
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE1902
Cancer Genome Anatomy Project (CGAP) Human LongSAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAAAAAAAAA
9
165.36
AAAAAAAAAAAAAACAA
1
18.37
AAAAAAAAAATCAAGGG
1
18.37
AAAAAAAAGAAGTTTTG
8
146.99
AAAAAAAAGGAAAGGGC
1
18.37
AAAAAAAATGAAGTAGG
3
55.12
AAAAAAACAAATTTTTC
1
18.37
AAAAAAACAATTGAAAA
1
18.37
AAAAAAACCCTTAATTC
1
18.37
AAAAAAAGGAAGTTTGT
1
18.37
AAAAAAAGGGGAACCTA
1
18.37
AAAAAAAGGGGTTTATT
2
36.75
AAAAAAATCAAATTTTT
6
110.24
AAAAAACAAACCTAAGA
1
18.37
AAAAAACCCAACCCAGA
3
55.12
AAAAAACCTAAAAAAAA
1
18.37
AAAAAACTAAAATTAAC
1
18.37
AAAAAAGAAAAAAAAAG
1
18.37
AAAAAAGAAAAAAGGCT
1
18.37
AAAAAAGCTTAACAGGG
1
18.37
Total number of rows: 21922 Table truncated, full table size 558 Kbytes .Supplementary data files not provided